Released: June 02, 2012
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Added: June 02, 2012 | Visits: 441
Thyroid hormones play an essential role for metabolism, growth and differentiation. Therefore, exact regulation of thyroid hormone levels is vital for most organisms. Although the principles of thyrotropic feedback control have been described decades ago we still have not yet gained comprehensive...
Platforms: Mac
Released: August 27, 2012
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Added: August 27, 2012 | Visits: 548
An award winning, integrated on-line learning environment where users experience the world of biology through discovery-based learning. GDL was developed as a series of curriculum-aligned and integrated games, modules, and interactive simulations covering an array of topics in biology. To meet...
Platforms: Mac
Released: October 13, 2012
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Added: October 13, 2012 | Visits: 441
A Molecular Biology software that provides tools with an intuitive interface to assists you in DNA cloning, sequence analysis and visualization. Serial Cloner 2.1 handles Features/Annotations and now allows to define, import and export, customized lists of Features. User can annotate any sequence...
Platforms: Mac
Released: September 25, 2012
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Added: September 25, 2012 | Visits: 311
Clotho is a comprehensive and reliable software for developing and managing synthetic biological systems.
It also provides a mechanism to begin the process of creating standardized data, algorithms, and methodologies for synthetic biology.
This tool allows for the development of independent...
Platforms: Windows
Released: November 15, 2012
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Added: November 15, 2012 | Visits: 776
Database development IDE for MySQL with many features: visual object editors, schema browser, SQL Insight, two-way visual query builder, templates & catalogs, export and import tools and much more.
Platforms: Windows
Released: October 12, 2012
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Added: October 12, 2012 | Visits: 387
Workbench for visualizing biological networks (regulatory, interaction, and metabolic). Can be used as a front-end for BNDB datawarehouses, but also as stand-alone tool.
Platforms: Windows, Mac, Linux
Released: October 03, 2012
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Added: October 03, 2012 | Visits: 538
The project aims to extend the PHP scripting language to enable PHP developers to write bioinformatics applications more rapidly than if they had to start from scratch using 'vanilla php'.
Platforms: Windows, Mac, Linux
Released: July 13, 2012
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Added: July 13, 2012 | Visits: 358
BiOrbit is a small Biological information project -- scripts and other useful stuff for the IT & Biology world.
Platforms: Windows, Mac, Linux
Released: December 09, 2012
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Added: December 09, 2012 | Visits: 236
CySBGN adds support to Cytoscape to import, visualize and analyse System Biology Graphical Notation (SBGN) maps.
Platforms: Windows, Mac, Linux
Released: September 27, 2012
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Added: September 27, 2012 | Visits: 455
DBEdit is a plugin for the Eclipse Workbench. It can be used to explore databases, edit tables directly with a spreadsheet like editor, edit SQL und more.
Platforms: Windows, Mac, Linux
Released: September 19, 2012
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Added: September 19, 2012 | Visits: 417
EcoloSim is a Simulation Framework for simple spatial models in biology and ecology, in Java.Typical problems are behavior of a herd of cattle, growth of microbe cells and other populations.
Platforms: Windows, Mac, Linux
Released: November 11, 2012
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Added: November 11, 2012 | Visits: 328
A command-line biochemical network compiler for systems biology.
Platforms: Windows, Mac, Linux
Released: June 03, 2012
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Added: June 03, 2012 | Visits: 507
The HSQLDB Plug-in embebs a HSQLDB pure-java database server into the Eclipse workbench for use as a data repository for Java applications developed using the IDE or for extending HSQLDB itself
Platforms: Windows, Mac, Linux
Released: November 09, 2012
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Added: November 09, 2012 | Visits: 347
hypKNOWsys aims at developing a Java-based workbench for knowledge discovery and knowledge management. Currently, hypKNOWsys has released two intermediate tools: DIAsDEM Workbench (text mining for semantic tagging) and WUMprep (Web mining pre-processing)
Platforms: Windows, Mac, Linux
Released: September 03, 2012
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Added: September 03, 2012 | Visits: 454
Platform for parallel computation in the Amazon cloud, including machine learning ensembles written in R for computational biology and other areas of scientific research. Home to MR-Tandem, a hadoop-enabled fork of X!Tandem peptide search engine.
Platforms: Windows, Mac, Linux
Released: November 27, 2012
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Added: November 27, 2012 | Visits: 283
This software is to help the those connected with Biology,Biotechnology,Bio Informatics.The user can select from the choices of proteins, nucleotides,etc(All those found on NCBI's website)and search for the specific results
Platforms: Windows, Mac, BSD, Linux
Released: November 01, 2012
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Added: November 01, 2012 | Visits: 350
A Java workbench and toolkit for developing, evaluating, and playing with classical and state-of-the-art optimization algorithms on standard benchmark problem domains; including reference algorithm implementations, graphing, visualizations and much more.
Platforms: Windows, Mac, Linux
Released: August 15, 2012
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Added: August 15, 2012 | Visits: 428
This Java software implements Profile Hidden Markov Models (PHMMs) for protein classification for the WEKA workbench. Standard PHMMs and newly introduced binary PHMMs are used. In addition the software allows propositionalisation of PHMMs.
Platforms: Windows, Mac, Linux
Released: October 15, 2012
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Added: October 15, 2012 | Visits: 335
'Plasmidb' is a database management system (RDMS) used to manipulate, view and store molecular biology information rapidly and easily. Editable information includes: constructed plasmids, clones, standard vectors, primers, antibiotics, enzymes and more
Platforms: Windows, Mac, Linux
Released: July 19, 2012
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Added: July 19, 2012 | Visits: 3.004
The Systems Biology Results Markup Language is a language describing data. Unlike flat data formats, SBRML allows describing the origin of the data as well. This project hosts a library and tools for using SBRML.
Platforms: Windows, Mac, Linux
Windows Software
Albina Merfyn - I find this to be really easy to use. I can...
