Biology Vocab Terms

The Systems Biology Markup Language (SBML) is an XML-based description language for representing computational models in systems biology. Visit the project web site to learn more.

Synthetic Biology Software Suite (SynBioSS) is composed of a wiki for biochemical kinetic constants, a graphical interface for simulating synthetic biological pathways, and a simulator that runs on either a desktop or supercomputer.

TinkerCell is a software for synthetic biology. The visual interface allows users to design networks using various biological 'parts'. Models can include modules and multiple cells. Users can program new functions using C or Python. www.tinkercell.


Platforms: Windows, Mac, Linux

Highlights search terms using jQuery when referer is a Google, Yahoo or Lycos search engine or within WordPress generated search results. This plugin is a light weight, low resource demanding and very simple fusion between How to Highlight Search Terms with jQuery - theme hack by Thaya Kareeson...


Platforms: PHP

Analyze a post and outputs the most frequent terms. This plugin is heavily based on Rob Marsh's Similar Posts plugin from which is a stripped down version for my personal purposes. Useful to have a list of related terms different from the categories.Installation : 1. Upload Post_Terms_List.php to...


Platforms: PHP

This plugin will automatically links to terms in your content to that term's page. Can be used for tags, categories and custom taxonomies. Based on Chen Ju's Automatic Tag Links.The plugin will only match full words, so if you have a term called "World" and use the word "worldwide" it will link...


Platforms: PHP

This module generates a block of related terms on the taxonomy overview pages.Terms are displayed as a tagcloud.Terms are related to each other if they appear on the same node. The more nodes they appear on together, the bigger they will be displayed in the cloud.How can you get involved? * Help...


Platforms: PHP

Top Terms is a lightweight module designed to find popular terms on a site. These can be displayed as a simple block or used by other modules.Popularity is measured by summing page hits for each article tagged with a term. It collects these results on a scheduled basis and caches them for better...


Platforms: PHP

The Book Auto Terms (BATS) module automatically assigns terms to book pages based on the selected parent of the book page. Used in combination with the Book and Taxonomy Access Control modules, the BATS module allows a site administrator to automatically assign who can view and edit new content...


Platforms: PHP

This module allows you to select related terms in taxonomy from another vocabulary. The default taxonomy module only allows you to select related terms from the same vocabulary.You setup the vocabulary relationship in the "Settings" fieldset of the "Edit Vocabulary" screen. Once this is done, you...


Platforms: PHP

Like elephants don't forget anything, so does't collective.elephantvocabulary. It provides a wrapper around for existing zope.schema vocabularies and make them not forget anything. Example usecase would be a vocabulary (source) of users which from certain point in time wants to hide / deactivate...


Platforms: *nix

Harvest-Vocab provides abstract models for defining vocabulary-like models and building a corresponding index for hierarchical self-related data.


Platforms: *nix

termBlaster provides a way to swap between multiple search engines and search terms with just a click, and along with features like the Search Basket, the Search Bar, an Internal Browser, and Browser Integration termBlaster will make your searches as simple as possible. Originally designed to...


Platforms: Windows

Text::Bloom can evaluate Bloom signature of a set of terms. SYNOPSIS my $b = Text::Bloom->new(); $b->Compute( qw( foo bar baz ) ); my $sig = $b->WriteToString(); $b->WriteToFile( afile.sig ); my $b2 = Text::Bloom::NewFromFile( afile.sig ); my $b3 = Text::Bloom->new(); $b3->Compute( qw(...


Platforms: *nix

StrBio is a set of Java classes and libraries useful for development of software for computational structural biology research. They are licenced under the LGPL. he strbio.org classes are the basis for several published research projects, including the Pred2ary secondary structure prediction...


Platforms: *nix

Vigyaan is an electronic workbench for bioinformatics, computational biology and computational chemistry. It has been designed to meet the needs of both beginners and experts. VigyaanCD is a live Linux CD containing all the required software to boot the computer with ready to use modeling...


Platforms: *nix

Lucene::Search::Highlight is a Perl module with highlight terms in Lucene search results. SYNOPSIS Load highlight classes into namespace use Lucene::Search::Highlight; Create Formatter and Query Scorer my $formatter = new Lucene::Search::Highlight::SimpleHTMLFormatter("< b >", "< /b...


Platforms: *nix

SAT Vocab Prep was developed to help you prepare for a Scholastic Assessment Test (SAT). Each test requires that you match words to descriptions (simple definitions); there are 20 words in each test. Each word is selected randomly from a built-in list of approximately 5,000 words. When the "Start...


Platforms: Mac

French Vocab was developed to be a fun way to practice your French vocabulary. The built-in default list includes over 1000 words and phrases. A Maintenance window is used to manage the words and phrases used in the game. Sound is supported. You can turn sound on/off using the "Sound" menu item....


Platforms: Mac

Spanish Vocab was developed to be a fun way to practice your Spanish vocabulary. The built-in default list includes over 1800 words and phrases. A Maintenance window is used to manage the words and phrases used in the game. Sound is supported. You can turn sound on/off using the "Sound" menu...


Platforms: Mac