Biological Data Set Analysis

Carpenter is a handy, easy to use application specially designed to help you find closed frequent item sets with the carpenter algorithm, which enumerates transaction sets, in contrast to many other frequent item set mining algorithms, which enumerate item sets. Such an approach can be highly...

VarCon is a data set provided as part of the Word List project. It contains a number of lists and tables of words that can be used to help automatically convert the English language between the differing spellings of its local dialects (American, British, Canadian). In an age where Spanish...

Free DBF Viewer (xBaseView DBF Viewer & DBF Converter) supports dBase, Clipper, FoxPro, Visual FoxPro and other DBF file formats. It supports the typical operations for databases, data export/import and SQL queries. In addition, this tool supports viewing Borland Client Data Set, CSV Text, TAB...


Platforms: Windows

A framework for data-flow based program analysis, implemented as a set of Java APIs. By using this framework, researchers and developers can easily implement analyses, test their correctness, and evaluate their performance. In addition, the framework all


Platforms: Windows, Mac, Linux

MBAS -- Macro-Biological Analysis System -- provides a set of interoperable tools for aid in the analysis of biological data. The backing database is currently PostgreSQL and the primary language is C, though some data entry tools are written in Java.


Platforms: Windows, Mac, BSD, Linux

This script is a Python module implementing a class which can be used for computing numerical statistics for a given data set.This recipe implements a descriptive statistical analysis class. It's intended to aid in computing numerical statistics for a given data set. It's well documented and...


Platforms: Windows, Mac, *nix, Python, BSD Solaris

Data::Page::Viewport is a Perl module to scroll thru data a page, or just an item, at a time. Synopsis This is a complete, tested, runnable program. #!/usr/bin/perl use strict; use warnings; use Data::Page::Viewport; # ----------------------------------------------- my(@data) =...


Platforms: *nix

IsTa is a small, simple application that will help you find closed frequent item sets by intersecting transactions, which is based on the insight that an item set is closed if it is the intersection of all transactions that contain it. Such an approach can be highly competitive in special...


Platforms: Windows

The STIanafor is a tool for spatio-temporal data vizualization, analysis and forecast of incidence of sexually-transmitted diseases and drug resistance of pathogens in the Russian Federation. Currently supports gonorrhoea (N. gonorrhoeae) and syphilis (T. pallidum). A set of real data for...


Platforms: Windows, Mac, Linux

In other words, this is a dependent drop down with a static data set consisting of the keys (which will be used for the first input selector) and the values (which will be in the dependent drop down).If the database's values do not uniquely identify a specific key, you may well want to save the...


Platforms: Windows, Mac, *nix, PHP, BSD Solaris

If you have a program that is outputting a data file with headers and blank lines, and if the exact order and location of those headers and blank lines varies from data set to data set, then it might be nice to read in a data file similar to how Excel does it. Each delimitted object, whether an...


Platforms: Matlab

GSA-SNP is a gene set analysis software that can process SNP data as well as gene and haplotype data.


Platforms: *nix

GMOD is a set of interoperable open source software components for visualizing, annotating, and managing biological data. See http://gmod.org for more.


Platforms: Windows, Mac, Linux

User friendly PDB (Protein Data Bank) file editor with graphic user interface for protein crystallographers to expedite selective parallel edit / data extraction / analysis of their PDB files


Platforms: Windows, Mac, Linux

This is the data set you will need to participate in the Data Visualization contest. For more information, refer to the rules posted here. http://www.mathworks.com/contest/datavis/rules.htmlYou can also follow the latest announcements on the contest blog here. http://blogs.mathworks.com/contest/


Platforms: Matlab

This code allows little applications to DEA (Data Envelopment Analysis), based on the Jeff Stuart Linear Programming code.


Platforms: Matlab

LocusView is a program for generating images of chromosomal regions annotated with genomic features, experimental data and analysis results.


Platforms: Mac

DICOM Dumper is a free and simple Java-based utility for decoding and dumping the content (Data Elements of the Data Set) of DICOM 3.0-compliant files. Since it is developed in Java, it should run on every OS for which a Java Runtime Environment is available.


Platforms: Windows, Mac

Statistics::Descriptive is a Perl module of basic descriptive statistical functions. SYNOPSIS use Statistics::Descriptive; $stat = Statistics::Descriptive::Full->new(); $stat->add_data(1,2,3,4); $mean = $stat->mean(); $var = $stat->variance(); $tm = $stat->trimmed_mean(.25);...


Platforms: *nix

A powerful data set generator. Within moments, it enables you to generate large amounts of realistic user-defined data with complete control over the type, range, amount and format. Randommite's power and flexibility saves time and money; it pays for itself on the very first day of use -...


Platforms: Mac