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Ungapped software
 

Ungapped

Find an ungapped pattern window from a set of protein sequences This program is a bioinformatics tool developed for helping biologists finding patterns from a set of protein sequences. The method is the first one that fully utilizes the advantages of the Dirichlet mixture models. It starts from a random pattern and iteratively improves the Bayesian log-odds...


Platforms: Matlab

License: Shareware Cost: $0.00 USD Size: 2.94 MB Download (43): Find an ungapped pattern window from a set of protein sequences Download

Released: July 17, 2012  |  Added: July 17, 2012 | Visits: 348

CisPlusFinder CisPlusFinder predicts cis-regulatory modules based on perfect local ungapped sequences using comparative sequence data from multiple organisms. An overview of the CisPlusFinder can be found in the flowchart.tif file and is described in the following publication: Pierstorff, N., C.M. Bergman &...


Platforms: Mac, BSD

License: Freeware Size: 1.15 MB Download (44): CisPlusFinder Download