Torn Lcl Mri

froi (FS-FAST ROI) is a suite of Perl scripts and modules to provide easy slice-, volume-, and surface-based ROI analysis of functional MRI (fMRI) data analyzed by FS-FAST and Freesurfer (http://surfer.nmr.mgh.harvard.edu).

A simple yet powerful mesh generator based on matlab/octave language, making finite-element mesh from surfaces or arbitrary 3D volumetric images (such as MRI/CT scans) with fully automatic workflows.

This program allows users to view the cross-sectional view of a CT or MRI volume image.It could easily be extened to see the coronal and sagittal plane images. Please modify the voxel depth, x, y and z dimensions for your image.


Platforms: Matlab

Author: Wang GangOrganization: Dept. of Diagnostic Radiolgy, National University of SingaporeEmail: wg_smile4ever@hotmail.comFunction BriefingCT and MRI researchers often need to burn the experimental images from aworkstation in hospital. Back to the lab, they often backup the CD datain a PC. The...


Platforms: Matlab

Straightforward Diffusion MRI (DTI) and Fiber Tracking (FT) functions and examples.DTI.m, will calculate the Apparent Diffusion Coefficient(ADC), fractional anistropy (FA), and diffusion tensor field, of a DTI datasets consisting of at least 6 dataset with different MRI gradients and at least 1...


Platforms: Matlab

Torn Realm is a strategic play-by-e-mail game. I have recently decided not to make this an Open Source project. It will still be released, but without the Source, you can get FRG's source if interested.


Platforms: Windows, Mac, Linux

Raw MRI data are generated analytically from k-space coordinates using the (continuous) Shepp and Logan head phantom function. K -space coordinates are typically entered as 2D matrices (frequency and phase encodes).This tool is ideal for testing reconstruction of non-linear k-space trajectory MRI...


Platforms: Matlab

CourseNotes lets you take notes during classes or meetings, and keep them organized by subject! Review your notes later and search through multiple class meetings and notes all at once. You can also keep ToDo lists and track assignments. CourseNotes for Mac also syncs over WiFi with...


Platforms: Mac

Maximum length sequence assuming distinctvalues = baseVal^powerVal-1 [ms]=mseqSearch(powerVal,baseVal) OUTPUT: ms: generated maximum length sequence, of length basisVal^powerVal-1 such that all values occur with equal frequency=basisVal except zero, which occurs basisVal-1 times INPUT: baseVal:...


Platforms: Matlab

A computer model has been developed that provides a realistic description of the variation of the human heart surface shape during a single cardiac cycle. The model is proposed for investigations in the field of biomedical engineering, where computer simulation is necessary.A MATLAB spline...


Platforms: Matlab

MRIotl -- a tool for editing MRI image files A user interface which displays and zooms all three orthogonal planes simultaneously, with a number of other features. This has been tested under matlab 5.0, matlab 5.1, and matlab 5.2 on both Windows 98 and Unix (linux and Solaris). Please see:...


Platforms: Matlab

Niftilib is a set of i/o libraries for reading and writing files in the nifti-1 data format. nifti-1 is a binary file format for storing medical image data, e.g. magnetic resonance image (MRI) and functional MRI (fMRI) brain images. Niftilib currently has C, Java, MATLAB, and Python libraries;...


Platforms: Mac

Users load multiecho MRI data and draw ROIs. AnalyzeNNLS creates a T2 distribution from the averaged decay data. Regional fractions and geometric T2 times can be determined. Please reference: Bjarnason TA, Mitchell JR. JMR 206:200-4 (2010).


Platforms: Windows, Mac, Linux

A flexible tool for medical research in magnetic resonance imaging (MRI) to generate parametric images (maps) from multiple types of pulse sequences (IR-prepared, Look-Locker, and MOLLI T1 mapping; single- and multi-echo T2/ T2* mapping).


Platforms: Windows, Mac, Linux

Semi Automatic brain masking for MRI volumes;Uses thresholding, erosion, dilation and overlap between slices for semi-automated masking of MRI brain datasets.


Platforms: Matlab

iRad is a DICOM workstation written in Cocoa for MacOSX. Using QuickTime, OpenGL, and open source databases iRad aims to provide an easy and efficient way to review medical images from CT, MRI, ultrasound, and other DICOM sources such as angiography a


Platforms: Mac, BSD, Linux

nu_corrector is a tool for correcting intensity non-uniformity artifact of image. Here, non-uniformity refers to image artifacts of vignetting and bias (e.g. intensity inhomogeneity, illumination etc.). This tool is an implementation of our single-image based vignetting or bias correction systems...


Platforms: Matlab

This function NLMF performs Non-Local Means noise filtering of 1D signal, 2D grey/color or 3D image data. The function is partly c-coded for cpu efficient filtering. Suitable for almost every image data type such as MRI, CT and normal photos.Warning !, Image filtering removes noise, but important...


Platforms: Matlab

File exchange contains a wealth of full-functioned, gui-based 3D medical image viewers. ct3 is a simple alternative that plots a 3D array containing CT or MRI greyscale values into 3 separate windows, and allows the use of the mousewheel to page from slice to slice. It allows the user to quickly...


Platforms: Matlab

This package contains demos that were used during a webinar on Image Processing. An archived version of the webinar itself can be found on our web site.;These demos illustrate how you can use MATLAB and the Image Processing Toolbox to solve image related problems in engineering and science. For...


Platforms: Matlab