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Shadowrun Genes software
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Shadowrun Genes

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Added: June 11, 2013 | Visits: 410

Synonym and Ortholog Translator The Synonym and Global Translator is a Gaggle Enabled Java program that enables a user to translate between different gene identifiers and find orthologous genes for a number of different species through the use of the BioNetBuilder database server. It is free to use, but is no longer actively...



Platforms: Mac

License: Freeware Size: 10.24 KB Download (37): Synonym and Ortholog Translator Download

Added: July 20, 2013 | Visits: 261

Clusterfunc Clusterfunc is a simple and fast method for Clustering functionally divergent genes by Functional Category. Changes in protein structure and function are reflected at the level of amino acid sequence. This principle suggests that functional divergence - changes in protein function, for instance...





Platforms: Mac

License: Shareware Cost: $0.00 USD Size: 1.02 MB Download (35): Clusterfunc Download

Added: November 04, 2013 | Visits: 346

Gene Machine: The Lac Operon Build a gene network! The lac operon is a set of genes which are responsible for the metabolism of lactose in some bacterial cells. Explore the effects of mutations within the lac operon by adding or removing genes from the DNA. Sample Learning Goals: * Predict the effects on lactose...


Platforms: Mac

License: Freeware Size: 1.14 MB Download (35): Gene Machine: The Lac Operon Download

Added: August 26, 2013 | Visits: 303

SAMMate SAMMate, a Graphical User Interface (GUI) RNA-seq analysis pipeline, allows biomedical researchers to quickly process SAM/BAM files and is compatible with both single-end and paired-end sequencing technologies. SAMMate automates some of more standard procedures in RNA-seq analysis. Features:...


Platforms: Mac

License: Freeware Size: 50.16 MB Download (35): SAMMate Download

Added: September 14, 2013 | Visits: 302

QTL Reaper QTL Reaper analyzes data from progeny of a genetic cross in experimental plants or animals. It seeks the location of genes that affect a heritable trait, and it is specially designed for analysis of gene expression measurements.


Platforms: *nix

License: Freeware Size: 256 KB Download (32): QTL Reaper Download

Added: August 04, 2008 | Visits: 1.227

BVTech Plasmid BVTech Plasmid is DNA plasmid drawing software that you can use to draw circle or linear plasmid maps with double strands or a single strand. You can label the plasmid with genes and restriction sites in different colors, text, and styles. Plasmid map can be highly customized. You can arrange...


Platforms: Windows

License: Freeware Size: 1.5 MB Download (587): BVTech Plasmid Download

Added: August 28, 2008 | Visits: 1.632

Alchemy Help Desk BVTech Plasmid is DNA plasmid drawing software that you can use to draw circle or linear plasmid maps with double strands or a single strand. You can label the plasmid with genes and restriction sites in different colors, text, and styles. Plasmid map can be highly customized. You can arrange...


Platforms: Windows

License: Freeware Size: 1.5 MB Download (557): Alchemy Help Desk Download

Added: August 13, 2010 | Visits: 1.001

PGAPy PGAPy is a wrapper for pgapack, the parallel genetic algorithm library, a powerfull genetic algorithm library by D. Levine, Mathematics and Computer Science Division Argonne National Laboratory. The library is written in C. PGAPy wraps this library for use with Python. The original pgapack...


Platforms: *nix

License: Freeware Size: 69.63 KB Download (92): PGAPy Download

Added: November 20, 2010 | Visits: 1.265

Evocosm Evocosm is a C++ Framework for Evolutionary Computing library. Evocosm is a set of classes that abstract the fundamental components of an evolutionary algorithm. Ill list the components here with a bit of introduction; you can review the details of the classes by downloading the code archives...


Platforms: *nix

License: Freeware Size: 348.16 KB Download (95): Evocosm Download

Added: June 16, 2010 | Visits: 988

Bio::SAGE::DataProcessing Bio::SAGE::DataProcessing module processes raw serial analysis of gene expression (SAGE) data. SYNOPSIS use Bio::SAGE::DataProcessing; $sage = Bio::SAGE::DataProcessing->new(); # open sequence and quality files open( READS, "library.fasta" ); open( QUAL, "library.qual.fasta" ); #...


Platforms: *nix

License: Freeware Size: 19.46 KB Download (92): Bio::SAGE::DataProcessing Download

Added: September 06, 2010 | Visits: 2.160

Free Simulated Radar Client Free Simulated Radar Client project is a framework for radar clients for virtual air traffic control networks. Free Simulated Radar Client is a framework for radar clients for virtual air traffic control networks (e.g., VATSIM and IVAO). Currently work is occuring on a radar client (an ASRC...


Platforms: *nix

License: Freeware Download (244): Free Simulated Radar Client Download

Added: October 08, 2010 | Visits: 840

Peptide::Pubmed Peptide::Pubmed is a Perl module that can extract peptide sequences from MEDLINE article abstracts. SYNOPSIS use Peptide::Pubmed; $parser = Peptide::Pubmed->new; $in = { PMID => q[15527327], Author => q[Doe JJ, Smith Q], Journal => q[J Biological Foo. 2004;8(2):123-30.], Title => q[Foo,...


Platforms: *nix

License: Freeware Size: 358.4 KB Download (98): Peptide::Pubmed Download

Added: August 25, 2010 | Visits: 948

Bio::GMOD Bio::GMOD is a unified API for Model Organism Databases. SYNOPSIS Check the installed version of a MOD use Bio::GMOD::Util::CheckVersions.pm my $mod = Bio::GMOD::Util::CheckVersions->new(-mod=>WormBase); my $version = $mod->live_version; Update a MOD installation use Bio::GMOD::Update;...


Platforms: *nix

License: Freeware Size: 71.68 KB Download (97): Bio::GMOD Download

Added: January 25, 2010 | Visits: 683

Take it! Take It! takes a screenshot of your current screen, puts it into a file, and uploads it to a webserver trought FTP. You can freely customize periods of time for your capture, and then see what its going on in your machine remotely.


Platforms: Mac

License: Freeware Download (89): Take it! Download

Added: January 25, 2010 | Visits: 660

iRNAi Nowadays, the use of so-called RNA interference is a common technique applied by molecular biologists to determine the function of the many genes in our genome.Unfortunately, the design of oligonucleotides, the building blocks for this technique, is a time-consuming and error-prone task. iRNAi...


Platforms: Mac

License: Freeware Download (94): iRNAi Download

Added: January 25, 2010 | Visits: 923

Oligo OLIGO is a multi-functional program that searches for and selects oligonucleotides from a sequence file for polymerase chain reaction (PCR), DNA sequencing, site-directed mutagenesis, and various hybridization applications. It calculates hybridization temperature and secondary structure of...


Platforms: Mac

License: Shareware Cost: $0.00 USD Download (163): Oligo Download

Added: January 25, 2010 | Visits: 569

Primer Validator Search oligonucleotide in multiple sequence files. Primer Validator is a scientific utility which allows researchers to verify whether the designed primer is unique for the gene of interest or not. It will be useful if that gene is a member of a large superfamily. In addition, researchers may...


Platforms: Mac

License: Shareware Cost: $0.00 USD Download (99): Primer Validator Download

Added: January 25, 2010 | Visits: 540

XPlasMap XPlasMap... Draw plasmid & genomic DNA maps showing restriction sites, genes, multiple cloning sites, and other features; copy and paste between maps; import from GenBank files; save as JPG or PNG


Platforms: Mac

License: Freeware Download (103): XPlasMap Download

Released: October 02, 2012  |  Added: October 02, 2012 | Visits: 621

GProcessor GProcessor is a small, easy to use application specially designed to help you with the statistical analysis of GenePix data, including dye effect adjustment and ANOVA analysis. Microarray is one of the most fascinating technologies in the millennium. It is a novel invention to exploit DNA...


Platforms: Windows

License: Freeware Download (450): GProcessor Download

Released: July 19, 2012  |  Added: July 19, 2012 | Visits: 436

FastSemSim FastSemSim is specially designed as a handy Python-based efficient implementation of a couple of semantic similarity measures. The main target of the project is to enable fast and easy calculation of similarity between proteins and genes using the Gene Ontology


Platforms: Windows

License: Freeware Download (381): FastSemSim Download

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