Run Length Encoding

Bio::Tools::Run::PiseWorkflow is a class to create a Pise workflow using Pise application objects as methods. A workflow is defined by a set of methods which all instanciate the class PiseApplication. SYNOPSIS # First, create a Bio::Tools::Run::AnalysisFactory::Pise object: my $factory = new...

Bio::Tools::Run::TribeMCL is a method for clustering proteins into related groups, which are termed protein families. SYNOPSIS use Bio::Tools::Run::TribeMCL; use Bio::SearchIO; # 3 methods to input the blast results # straight forward raw blast output (NCBI or WU-BLAST) my @params =...

Bio::Tools::Run::PiseApplication::align2model is a Bioperl class for align2model - create a multiple alignment of sequences to an existing model. Parameters: align2model (String) run (String) Run name db (Sequence) Sequences to align (-db) model_file (InFile) Model (-i) pipe:...


Platforms: *nix

Bio::Tools::Run::PiseApplication::consensus is a Perl module. Bioperl class for: CONSENSUS Identification of consensus patterns in unaligned DNA and protein sequences (Hertz, Stormo) References: G.Z. Hertz and G.D. Stormo. Identification of consensus patterns in unaligned DNA and protein...


Platforms: *nix

Bio::Tools::Run::PiseApplication::charge is a Perl module. Bio::Tools::Run::PiseApplication::charge Bioperl class for: CHARGE Protein charge plot (EMBOSS) Parameters: (see also: http://bioweb.pasteur.fr/seqanal/interfaces/charge.html for available values): charge (String) init...


Platforms: *nix

Bio::Tools::Run::PiseApplication::freak is a Perl module. Bio::Tools::Run::PiseApplication::freak Bioperl class for: FREAK Residue/base frequency table or plot (EMBOSS) Parameters: (see also: http://bioweb.pasteur.fr/seqanal/interfaces/freak.html for available values): freak...


Platforms: *nix

Bio::Tools::Run::JavaRunner is a Perl module that can run java programs. SYNOPSIS my $runner = Bio::Tools::Run::JavaRunner->new(-jar => $jar); $runner->run(); This module is probably incomplete. It is intended to be a wrapper for running java programs..


Platforms: *nix

run in xterm is an servcie menu which adds "run in xterm" & "run in xterm as root" to action menu on binary files, scripts etc. It has 2 languages: english and polish. Installation: copy/save this file in ~/.kde/share/apps/konqueror/servicemenus.


Platforms: *nix

IPC::Run::Simple is a simple system() wrapper. SYNOPSIS # Run a command and check whether it failed use IPC::Run::Simple; run("echo Hello, O Cruel World") or die "Command failed"; # Describe the failure use IPC::Run::Simple qw($ERR); run("echo Hello, O Cruel World") or die "Command...


Platforms: *nix

run adds a service menu for all file types. This service menu will just call the file in the command line using the active folder as work folder. Makes running some scripts and applications much easier (Some require work folder to be the same where they are located so double-clicking does not...


Platforms: *nix

Full conversion between more than 100 different encodings, like Unicode, ANSI, Latin, Cyrillic, ASCII, UTF8, and others lets you easily save multiple text files and strings in any encoding. Source encoding can be detected automatically, and destination encoding has lots of options like Big...


Platforms: Windows

Encoding Converter, is an easy-to-use application for Windows that can help you convert encoding of multiple ansi/ utf-8/ unicode plain text documents to and from any encoding, either interactively or in batch mode. It can convert encoding of thousands of files within a few minutes minutes....


Platforms: Windows, Mac

Run with Parameters is a free utility that allows to run programs with arguments directly from Windows Explorer. There is no need to run a program from the command prompt. This free shell extension, adds a menu item to the right click context menu of Windows Explorer, that if selected...


Platforms: Windows

Smart1DCutting is the smart solution for length cutting optimization. Easy to use, with an intuitive interface, our software can help your business by reducing material waste and cost. All you have to do is input sources and parts and run optimization. Cutting plans can be saved and reused later...


Platforms: Windows

The Song Length Finder is a quick and easy tool that lets you search your music collection for songs of a certain length. Maybe you have a music compilation CD that you have to fill the last 5 minutes of. Maybe there's a movie scene that is exactly 2:17 long. Maybe you're a DJ who has to...


Platforms: Windows

Chilkat Charset simplifies international character encoding conversion. It supportsthe conversion of any character encoding to and from Unicode and utf-8. It supportsdirect conversions among the alternative character encodings for Japanese, Chinese,Korean and other languages. For example, one can...


Platforms: Windows

Official Encoding is a small applet that will tell you the official name of any given Java encoding and whether it is supported by Java. It will also display some of the characters available with that encoding. NOTE: For non-military use only. for Windows2K, XP, Vista


Platforms: Windows, XP, Windows Vista

Encoding Recogniser will help you determine what encoding was used to write a file and it will display the file in hex or in decoded characters using any of the encodings that are supported by Java. Requirements: Java 1.5 and above for WindowsNT, 2K, XP, 2003, Vista, 7


Platforms: Windows, 2K, XP, 2003, Windows Vista, 7

CLRAS (Run with CLR) allows you to run a managed application with a runtime version of your choice. For example, you can take an application complied against CLR version 1.0 and it run against version 2.0 of the runtime (or vice versa) without making any changes to the application code or...


Platforms: Windows, Windows Vista, 7, 7x64

The game Tobi on the Run Platinum bases on the very popular classic arcade hit Lode Runner. Tobi tries to collect the golden donuts which are placed within the levels; but nasty bullies are after him as well. Tobi tries to get rid of his pursuers by climbing and jumping over ladders and stakes....


Platforms: Windows