Pubmed

Peptide::Pubmed is a Perl module that can extract peptide sequences from MEDLINE article abstracts. SYNOPSIS use Peptide::Pubmed; $parser = Peptide::Pubmed->new; $in = { PMID => q[15527327], Author => q[Doe JJ, Smith Q], Journal => q[J Biological Foo. 2004;8(2):123-30.], Title => q[Foo,...

Lists the direct PDF link next to each search result in PubMed, using API of http://thepaperlink.appspot.com It enhances the existing results display by showing: * Impact Factor of the Journal * Direct link to its PDF file * External page of the article * Faculty 1000 score and comment page link

As part of implementation of CMS for Biomedical applications, it is often a requirement to display publications from well known databases. One such database is called PubMed which is provided National Center for Biotechnology Information, National Library of Medicine and National Institutes of...


Platforms: PHP

RefSense is the name of both a web interface to PubMed, and a set of command line tools for accessing PubMed. RefSense was previously distributed as Biblio. The web interface provides easy access to PubMeds data as well as some useful tools not found at the actual PubMed site. The command...


Platforms: *nix

This module allows to import PubMed articles by ID and by Search term into the biblio database. Moderated mass retrieval per Batch API and cronjob as well as automatic updates in cron makes it a valuable addition to the biblio module.Built mostly by agaric on behalf of the Science Collaboration...


Platforms: PHP

Papers is an application that manages many PDF files of articles, whose information can be obtained by PubMed. If you have articles as PDF files whose filenames are PMID.pdf (e.g. 10867176.pdf), you can import the articles into iPapers by drag and drop operation. PMID is the unique ID provided by...


Platforms: Mac

RefNavigator is a professional bibliography tool for researchers, scholars and students. It is designed to search scientific references from Internet and generate bibliographies. It can manage your references and notes, group references automatically by year, author, keywords or tags....


Platforms: Windows

PubMedMaker is a bibliographic application for those in the fields of medicine and biology. It will convert PubMed data to FileMaker Pro files simply by dragging and dropping. PubMed is a free on-line web site for MEDLINE offered by National Library of Medicine. PubMedMaker also makes Reference...


Platforms: Mac

PubMedMaker is bibliography software, similar in principle to EndNote, Pro-Cite and Reference Manager. This shareware program is designed for anyone who wishes to manage medical literature data with FileMaker Pro database. We aim at easy to use and intuitional operation for managing MEDLINE data....


Platforms: Mac

A fast, efficient search tool for scientists, medical professionals and students who rely on the ability to quickly access the millions of research papers indexed in PubMed. By combining a simple, efficient user interface with fast access to the PubMed database, PubSearch lets you concentrate on...


Platforms: Mac

MyPHPBib is a web application for managing bibliographic references. It can import references in several formats (e.g., EndNote and RIS), as well as importing references directly from PubMed. MyPHPBib is written in PHP and uses MySQL as the database. MyPHPBib requires MySQL, PHP, Perl 5, and...


Platforms: Windows, Mac, *nix, PHP, BSD Solaris

BioMail is a small web-based application for medical researchers, biologists, and anyone who wants to know the latest information about a disease or a biological phenomenon. It is written to automate searching for recent scientific papers in the PubMed Medline database.Periodically BioMail does a...


Platforms: *nix, Perl, BSD

Estimate LDL cholesterol based on measured total cholesterol (TC), HDL, and triglycerides (TG).The function 'estimateLDL(TC, HDL, TG, InputUnits)' provides an estimate for the LDL cholesterol on measured total cholesterol (TC), HDL cholesterol, and triglycerides (TG).For most cases, the classical...


Platforms: Matlab

MyPHPBib is a web application for managing bibliographic references.It can import references in several formats (e.g., EndNote and RIS), as well as importing references directly from PubMed. MyPHPBib is written in PHP and uses MySQL as the database.MyPHPBib requires MySQL, PHP, Perl 5, and...


Platforms: PHP

* Ali Baba helps you to search and visualize protein- and disease-centered information from PubMed. * Ali Baba displays the search result in form of a graph -- biological/medical objects such as proteins, diseases, or drugs are nodes; meaningful associations between them are edges. * Find out...


Platforms: Mac

Use Publitor to assist your management of Biomedical References. Search Pubmed and use Publitor to add references to your word document, Email and print references and more...


Platforms: Windows

Phplabware project is a web-driven database management system. Phplabware runs on a server and is accessed through a web browser. Databases can be designed within a web-interface. Data-entry takes place in forms, which can be altered using phplabwares plugin mechanism. Search results can be...


Platforms: *nix

WIKINDX is a free bibliographic and quotations/notes management and article authoring system designed either for single use (on a variety of operating sytems) or multi-user collaborative use across the internet. Features:User: - 37 resource types. - Multi-user mode - create and manage your own...


Platforms: Windows, Mac, *nix, PHP, BSD Solaris

Bookends is a full featured and cost-effective bibliography/reference and information management system for students and professionals.With Bookends you can easily import references (information about journal articles, books, etc.) from EndNote, and directly search and import from hundreds of...


Platforms: Mac

Reference Miner searches the Internet to find and display reference information: PubMed, Amazon (Amazon US, Amazon UK, Amazon Germany, Amazon Japan), and the Library of Congress. Special features include the display of book cover art (Amazon) and the ability to easily perform complex searches.The...


Platforms: Mac