Protein Synthesis Diagrams

GRaPe - a platform-independent software tool for building integrative gene-reaction-protein (GRP) networks. It generates the kinetic equations for each reaction and outputs a SBML document. It also implements two methods for parameter estimation.

User friendly PDB (Protein Data Bank) file editor with graphic user interface for protein crystallographers to expedite selective parallel edit / data extraction / analysis of their PDB files

The Protein Geometry Database hosts the development code for a flexible database for searching protein geometry, as well as a library for accessing this data for protein modeling & refinement programs.


Platforms: Windows, Mac, Linux

Tools for mass spectrometry, especially for protein mass spectrometry and proteomics: Quantification tools, converters for Applied Biosystems (Q Star and Q Trap), calculation of in-silico fragmentation spectra, converter for Mascot result files


Platforms: Windows, Mac, Linux

Venn diagrams are an interesting method for rendering triadic relations on a two dimensional drawing surface. Certain marks (or annotations) indicate the existence of variables or constants in the distinguishable regions.


Platforms: Windows, Mac, Linux

The Visualization of Protein-Ligand Graphs (VPLG) software package computes and visualizes protein graphs. It works on the super-secondary structure level and uses the atom coordinates from PDB files and the SSE assignments of the DSSP algorithm.


Platforms: Windows, Mac, BSD, Linux

Density granular synthesis. - eight granular sreams simultaleously .loading up to 12 sound-files (aiff,wav,mp3) for each stream (96 tot.) - wave-pad scrub, wrap-around selection, trim, normalize draw, etc… .wavepad grid quantize: zero-crossing, bpm, phase and samples .buffer windows (resizable)...


Platforms: Mac

3-Hours of Analog Synthesis Tutorial-Videos. Steam the HD version of this tutorial from: macProVideo.com & NonlinearEducating.com Learn how Analog synths fit into your modern music production workflow in this amazing tutorial for A


Platforms: Mac

Dot is a very nice graph description language developed at MIT. Combined with Python, it makes an ideal tool to automatically generate diagrams. This script produces beautiful inheritance diagrams for Python classes (and metaclasses too). In particular the recipe allows to display the MRO (Method...


Platforms: Windows, Mac, *nix, Python, BSD Solaris

We use the SRK equation of state to compute the correction factor due to gas-phase nonideality as a result of the high pressure applied in the ammonia synthesis. We also compute the extent of reaction. Plots of these two quantities versus pressure for temperature equal to 800K are presented. The...


Platforms: Matlab

The sixth MATLAB Programming Contest, Protein, will run from November 6-13, 2002.This contest concerns a very simplified two-dimensional version of the protein folding problem. Given the amino acid sequence of a simplified protein, your job is to determine a final "optimally folded"...


Platforms: Matlab

A very easy symbolic method for reduction of block diagrams or signal flow graphs with Matlab is presented. The method can be applied to every kind of diagram and it is possible to obtain in one stage all transfer functions for a given input. The method is validated with some examples, including...


Platforms: Matlab

This program is a bioinformatics tool developed for helping biologists finding patterns from a set of protein sequences. The method is the first one that fully utilizes the advantages of the Dirichlet mixture models. It starts from a random pattern and iteratively improves the Bayesian log-odds...


Platforms: Matlab

Allows the user to calculate her optimum post-workout protein shake recipe and determine right mixture of these three essential ingredients, plus her daily recommended protein dose: 1. Protein 2. Carbohydrate 3. WaterAll calculations are based on her body weight. Install : 1. Unzip the...


Platforms: PHP

Platforms: Windows

An all-inclusive diagramming software for Windows system that is capable for 260+ drawing types including flowcharts, mind maps, org charts, infographics, floor plans, network diagrams, Gantt charts, electrical schematics... and that is just the beginning! More than 260 kinds of diagrams help...


Platforms: Windows, Windows 8, Windows 7

Edraw is a new flowchart software, which creates flowcharts and business charts with minimum time loss for you. Support basic flowcharts, organizational charts, business charts, hr diagrams, work flowcharts, programming flowcharts and network design diagrams. Top 10 Reasons to Use Edraw:...


Platforms: Windows

RoboBlather is a free text-to-speech application written using .NET 3.0. Rendered speech can be saved to a .WAV file and both talking speed and speech synthesis voice are user-selectable. It works on every version of Windows that support .NET 3.0, which includes every version from Windows XP...


Platforms: Windows, Windows 8, Windows 7

A graphical overview of your database solution. Don't spend hours trying to understand your database, see it with SQL Diagrams. Graphically understand, how your tables, views, SPs, UDFs, triggers and other database objects interact, and more. Upcoming are command flow diagrams, data flow...


Platforms: Windows

Edraw is a new flowchart software, which creates flowcharts and business charts with minimum time loss for you. Support basic flowcharts, organizational charts, business charts, hr diagrams, work flowcharts, programming flowcharts and network design diagrams. Top 10 Reasons to Use Edraw:...


Platforms: Windows, Windows 8, Windows 7