Neuroscience

It can be used to study and analyze behavioral neuroscience experiments.It allows an easy creation of trial lists factorial designs including various constraints as run length, factor levels or trial types. Requirements: - MATLAB 7.8 or higher

The Behavioral Monitoring Tool is an application used to record and analyze behavioral experiments in neuroscience. The sofware is planned to perform three types of experiments (open field - water maze - forced swimming). The Open Field Module is currently supported.

If the input is a bandlimited signal containing components at DC - 0.5Fs where Fs is the sample rate, SINCRESAMPLE will return the signal that would have been seen with a higher sampling rate (and the same filter settings). The algorithm depends on the fact that the bandlimited signal is...


Platforms: Matlab

a program calculates Relative wavelet energy with brief tutorial Reference: O.A. Rosso, M.T. Martin b, A. FigliolaEEG d-deDUanalysis using wavelet-based informationd-deDt Journal of Neuroscience Methods 153 (2006) 163d-deOCt182


Platforms: Matlab

The Mass Univariate ERP Toolbox is a freely available set of MATLAB functions for performing mass univariate analyses of event-related potentials (ERPs), a noninvasive measure of neural activity popular in cognitive neuroscience. A mass univariate analysis is the analysis of a massive number of...


Platforms: Matlab

NeurAnim is a research aid for computational neuroscience. It is used to visualise and animate neural network simulations in 3D, and to render movies of these animations for use in presentations.


Platforms: *nix

Applying magnetic signals to your brain for consciousness exploration, spiritual growth, altered-state experience, and learning brain structure and function. Shakti LITE works by helping your brain to access altered states of consciousness. Your brain produces electrical signals as it operates,...


Platforms: Windows

KoalaCalc is a free multi-purpose calculator for Mac OS X. In its compacted state, it looks similar to the standard calculator that comes with Mac OS X. However, simply click the 'advanced features' box and KoalaCalc comes to life to become one of the most advanced scientific, conversion,...


Platforms: Mac

Introducing KoalaCalc Classic, the long-awaited Mac OS 9 port of the free multi-purpose calculator for Mac OS X. In its compacted state, KoalaCalc looks similar to the standard calculator that comes with the Mac OS. However, simply click the 'advanced' button and KoalaCalc comes to life to become...


Platforms: Mac

Amira is a powerful, multifaceted software platform for visualizing, manipulating, and understanding Life Science and bio-medical data coming from all types of sources and modalities. Amira is the leading software solution that satisfies even your most demanding needs to work with clinical or...


Platforms: Windows

Software tools for visual psychophysics research. The focus of these tools is amblyopia research, but they can be used in some related visual neuroscience research tasks.


Platforms: Windows, Mac, Linux

Psykinematix is a new OpenGL-based Software Package dedicated to Visual Psychophysics running on Mac OSX. It consists in a unique stand-alone application that does not require any programming skill to create and run complex experiments. Easy to use, subject-friendly, powerful and reliable,...


Platforms: Mac

Modular toolkit for Data Processing (MDP) is a Python data processing framework. Implemented algorithms include: Principal Component Analysis (PCA), Independent Component Analysis (ICA), Slow Feature Analysis (SFA), Growing Neural Gas (GNG), Factor Analysis, Fisher Discriminant Analysis (FDA),...


Platforms: Windows, Mac, *nix, Python, BSD Solaris

The accompanying code is the simulation of a simplified version of a synfire chain in a cortical network, inspired by the ideas of Abeles (1982, 1991), Bienenstock (1995), and Diesmann et al. (1999). In a synfire chain groups, or pools, of neurons are connected in a feedforward arrangement. The...


Platforms: Matlab

function [optW, C, W] = sskernel(x,W,str)% [optW, C, W] = sskernel(x,W,str)%% Function `sskernel' returns an optimal bandwidth (standard deviation)% of the Gauss density function used in kernel density estimation.% Optimization principle is to minimize expected L2 loss function between% the...


Platforms: Matlab

This function is provided to extract geometric properties of a volume array that has been thresholded and characterized by a patch (of triangular faces) generated by isosurface(). Its purpose is to calculate the area of a nerve cell dendrite, and also locate its center, both described as a...


Platforms: Matlab

This function is only slightly modified from the original topoplot.m function which is part of EEGLAB. I have used EEGLAB v6.01b while modifying the topoplot function into topoplot_connect. The main purpose is visually summarized in the attached screenshot.I used the topoplot_connect function...


Platforms: Matlab

PsychoPy is an open-source application to allow the presentation of stimuli and collection of data for a wide range of neuroscience, psychology and psychophysics experiments. It???*a*?s a free, powerful alternative to Presentation??a*zNz or e-Prime??a*zNz, written in Python (a free alternative to...


Platforms: Mac

sigTOOL is a general-purpose signal processing package that runs in the MATLAB environment. It is open-source and free-of-charge. Built-in analyses are currently targeted at those working in electrophysiology and neuroscience. If you are working in these fields, sigTOOL's extensive file import...


Platforms: Mac

The OpenElectrophy project aims to simplify data- and analysis-sharing for intra- and extra-cellular recordings. In short with OpenElectrophy you will be able to play with neural signals, spikes and oscillations. OpenElectrophy has three main goals: * to be a good storage management...


Platforms: *nix