Named Chemical Reaction

A high-performance simulation package for sampling the chemical and reaction-diffusion master equations. Primarily intended for running stochastic simulations of microbial cells.

NG4J - 'Named Graphs API for Jena' is an extension to the Jena Semantic Web framework for parsing, manipulating and serializing sets of Named Graphs. For details about Named Graphs see http://www.w3.org/2004/03/trix/

Instead of requiring the named attributes list for each instantiation of the tuple, this implementation 'Spawns' a derived tuple class that is taylored to the named attributes specified. And it is this Spawned class that is then used to instantiate tuples. This approach effectively separates...


Platforms: Windows, Mac, *nix, Python, BSD Solaris

Matlab implementation of a monodomain reaction-diffusion model in 2-D. The model equations are a variant of the Fitzhugh-Nagumo equations modified to simulate the cardiac action potential. The progression of the two normalized state variables, membrane voltage (v) and recovery (r), is computed...


Platforms: Matlab

ENZyme KINetics is the study of the chemical reactions that are catalysed by enzymes. In enzyme kinetics the reaction rate is measured and the effects of varying the conditions of the reaction investigated. Studying an enzyme's kinetics in this way can reveal the catalytic mechanism of this...


Platforms: Matlab

We use the SRK equation of state to compute the correction factor due to gas-phase nonideality as a result of the high pressure applied in the ammonia synthesis. We also compute the extent of reaction. Plots of these two quantities versus pressure for temperature equal to 800K are presented. The...


Platforms: Matlab

XLSRANGENAMES Returns a list of named ranges in an excel workbook RangeNames = XLSRangeNames(filename) RangeNames is a (n x 2) cell array with the name of the named range in the first column and the value (aka location) in the second column The value is an excel formula similar to: '=Sheet1!$A$1'...


Platforms: Matlab

Stanford NER (also known as CRFClassifier) is a Java implementation of a Named Entity Recognizer. Named Entity Recognition (NER) labels sequences of words in a text which are the names of things, such as person and company names, or gene and protein names. The software provides a general...


Platforms: Mac

As of January 2018, the Kintecus simulation software has been cited over 300 peer reviewed high impact factor journals: SCIENCE, JACS, PNAS, J. Phys. Chem.A, NATURE, PCCP, J. Biol. Chem., Plas. Chem. Plas. Proc., Int. J. Chem. It is an Industrial Strength/Research Grade chemical modeling,...


Platforms: Windows, Windows 8, Windows 7, Windows Server

A small game that times the reactions of the user and displays the results onscreen. Written as an alternative to the DirectX powered Reaction Timer For Windows. Best times can be submitted to http://www.reaction-timer.co.nr


Platforms: DOS, Windows, Windows CE

This Periodic Table is an excellent tool for both students and serious researchers. It has over 20 types of data on each element and all known isotopes in customizable, user-expandable tables. All sixteen numeric data types (plus any user-added data) can be corelated in particle or line graphs....


Platforms: Windows

ChemMaths is a engineering,mathematical and chemistry program. In addition interfaces with media player to allow playing of music,videos, ripping,burning cd's and includes a web browser to further solve problems, obtain information using the web. Software suitable for...


Platforms: Windows, Windows 7, Windows Server

EquationsPro is a chemical engineering,mathematical and chemistry program. Software suitable for chemistry,chemical engineering students and professionals. Solves 500+ chemical/electrical/civil/mechcanical engineering,design,distillation, physics, and mathematical equations. Contains 200+ unit...


Platforms: Windows, Other

ProsimGraphsPro is a process simulation package. Allows for pipe flow processes to be to be simulated. Vessels, pumps, valves can be added and controls manipulated for various situations. Draw, rotate, manipulate 2D/3D graphs. Contains many predefined mathematical graph equations. Chemdesinger...


Platforms: Windows, Other

For the set of chemical elements (Ba, Sr, Ca and so on) there is a function enabling to print capital and small letters without switching by "Shift" and "Caps Lock" keys. Figures specifying the number of atoms in chemical formula (H2SO4) are automatically made subscripts, and atom's oxidation...


Platforms: Windows

Tao::DBI::st is a Perl module for DBI statements with portable support for named placeholders. SYNOPSIS use Tao::DBI qw(dbi_connect dbi_prepare); $dbh = dbi_connect($args); $sql = q{UPDATE T set a = :a, b = :b where k = :k}; $stmt = $dbh->prepare($sql); $rc = $stmt->execute({ k => $k, a...


Platforms: *nix

Class::ParmList is a Perl module with methods for processing named parameter lists. SYNOPSIS use Class::ParmList qw(simple_parms parse_parms); $thingy->some_method({ -bgcolor => #ff0000, -textcolor => #000000 }); sub some_method { my ($self) = shift; my ($parm_ref) = @_; my $parms...


Platforms: *nix

The world of Darwinia is a virtual themepark, running inside a computer network built by a computer genius named Dr Sepulveda. Darwinia is populated by a sentient evolving life form called the Darwinians. They are the product of a decades worth of research into genetic algorithms..


Platforms: *nix

MathML::Entities is a Perl module that can convert XHTML+MathML Named Entities to Numeric Character References. SYNOPSIS use MathML::Entities; $html = © by me; # convert named HTML entities to character references: $numeric = name2numbered($html); # © by me # convert named HTML...


Platforms: *nix

Opcode is a Perl module created to disable named opcodes when compiling perl code. SYNOPSIS use Opcode; Perl code is always compiled into an internal format before execution. Evaluating perl code (e.g. via "eval" or "do file") causes the code to be compiled into an internal format and...


Platforms: *nix