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Template::Tools::ttree module can process entire directory trees of templates. SYNOPSIS ttree [options] [files] The ttree script is used to process entire directory trees containing template files. The resulting output from processing each file is then written to a corresponding file in a...

RPM Package Maker is a frontend for other linux tools in order to help linux users to create RPM packages quickly and easily. Since version 0.8 minimal spec files are kept in: /usr/src/packages/SPECS/mini Whats New in This Release: - Small improvements and bugfixes. RPM Package Maker...

Better Weather contains a couple of scripts using normal KDE and Linux tools to provide better display of weather info than KDEs weather applet. It downloads the information from the US national weather service and maps from weather.com. Two launchers on the main menubar bring up the window...


Platforms: *nix

Bio::Tools::Run::PiseWorkflow is a class to create a Pise workflow using Pise application objects as methods. A workflow is defined by a set of methods which all instanciate the class PiseApplication. SYNOPSIS # First, create a Bio::Tools::Run::AnalysisFactory::Pise object: my $factory = new...


Platforms: *nix

Bio::Tools::AlignFactory is a base object for alignment factories. SYNOPSIS You wont be using this as an object, but using a dervied class like Bio::Tools::pSW Holds common Alignment Factory attributes in place.


Platforms: *nix

Bio::Tools::Run::TribeMCL is a method for clustering proteins into related groups, which are termed protein families. SYNOPSIS use Bio::Tools::Run::TribeMCL; use Bio::SearchIO; # 3 methods to input the blast results # straight forward raw blast output (NCBI or WU-BLAST) my @params =...


Platforms: *nix

802.11b Network Discovery Tools is a gtk tool to scan for 802.11b networks using wavelan/aironet hardware and Linux wireless extensions. It includes the ability to log coordinates of found networks from a GPS device that is NMEA-compatible, and can be linked to a serial port. It currently logs...


Platforms: *nix

Bio::Tools::Run::PiseApplication::fasta is a Bioperl class for sequence database search. Parameters: fasta (Excl) Fasta program query (Sequence) Query sequence File pipe: seqfile seqtype (Excl) Is it a DNA or protein sequence (-n) protein_db (Excl) Protein Database nucleotid_db...


Platforms: *nix

Bio::Tools::Run::PiseApplication::align2model is a Bioperl class for align2model - create a multiple alignment of sequences to an existing model. Parameters: align2model (String) run (String) Run name db (Sequence) Sequences to align (-db) model_file (InFile) Model (-i) pipe:...


Platforms: *nix

Bio::Tools::Run::PiseApplication::consensus is a Perl module. Bioperl class for: CONSENSUS Identification of consensus patterns in unaligned DNA and protein sequences (Hertz, Stormo) References: G.Z. Hertz and G.D. Stormo. Identification of consensus patterns in unaligned DNA and protein...


Platforms: *nix

Bio::Tools::Run::PiseApplication::charge is a Perl module. Bio::Tools::Run::PiseApplication::charge Bioperl class for: CHARGE Protein charge plot (EMBOSS) Parameters: (see also: http://bioweb.pasteur.fr/seqanal/interfaces/charge.html for available values): charge (String) init...


Platforms: *nix

ATA over Ethernet Tools are intended for use in conjunction with an ATA over Ethernet (AoE) driver for a Linux 2.6 kernel. They perform simple tasks like listing available devices, triggering device discovery, and restricting the network interfaces on which AoE is performed. Whats New in This...


Platforms: *nix

VK Toolset project is intended to aide MPEG developers and hobbyist in understanding and creating conformant MPEG streams. The current version focuses on the MPEG system layer (MPEG-1 System, MPEG-2 Program Stream), and MPEG-2 Transport bitstreams). Whats New in This Release: vk_tafe - UI...


Platforms: *nix

Gecko Multimedia System is a complete media solution, able to play almost all media types and supports scheduled tv-recording from online tv-guides. It is intended to replace your VCR, DVD, MP3- and CD-player into one single software-unit. It is mainly for use in Linux-systems (well, its the...


Platforms: *nix

The ICMP Hostname Tools for Linux include a responder daemon, a lookup tool, and a nameswitch module to handle ICMP host name functions. The NSS module caches all requests (including failures) and honors the TTL value sent by the responding host. It uses a configuration file called...


Platforms: *nix

GetCodecs is a simple applet written in python with a GTK2 GUI that downloads, installs, and configures your system to use the various multimedia formats (MP3, DivX, DVD, etc) that are not shipped with many distributions (such as RedHat). Misc Audio/Video Support: The following codecs are...


Platforms: *nix

Cmos password recovery tools decrypts password stored in cmos used to access BIOS SETUP. Works with the following BIOSes: - ACER/IBM BIOS - AMI BIOS - AMI WinBIOS 2.5 - Award 4.5x/4.6x/6.0 - Compaq (1992) - Compaq (New version) - IBM (PS/2, Activa, Thinkpad) - Packard Bell - Phoenix...


Platforms: *nix

Heirloom Development Tools package provides yacc, lex, m4, make, and SCCS as portable derivatives of the utilities released by Sun as part of OpenSolaris. The OpenSolaris utilities were in turn derived from the original Unix versions, and are assumed be conforming implementations of the POSIX...


Platforms: *nix

Bio::Tools::CodonTable is a bioperl codon table object. SYNOPSIS # This is a read-only class for all known codon tables. The IDs are # the ones used by nucleotide sequence databases. All common IUPAC # ambiguity codes for DNA, RNA and animo acids are recognized. # to use use...


Platforms: *nix

gdvrecv is a set of tools for FreeBSD to receives audio and video data from a digital camcorder via an IEEE 1394 (widely known as FireWire) link and stores them into an DV file. This software package is composed by : - firewire, a Python module for the FreeBSD firewire sub system - dvrecv, a...


Platforms: *nix