Homologous

ORMA (Oligonucleotide Retrieving for Molecular Applications) is a series of integrated scripts in Matlab, which performs an accurate search of all the positions able to specifically discriminate one species among homologous ones. ORMA also performs an accurate selection of high-quality...


Platforms: Matlab

Phylo-mLogo is an interactive multiple-logo visualization tool for large-number sequence alignments which allows the user to visualize the global profile of whole multiple sequence alignment and to hierarchically visualize homologous logos of each clade simultaneously.


Platforms: Mac

FSA is a probabilistic multiple sequence alignment algorithm which uses a "distance-based" approach to aligning homologous protein, RNA or DNA sequences.


Platforms: *nix

Toolkit to examine the topology of a phylogenetic tree, place amino acid substitutions on specific branches, polarize them and compare amino acid sequences of homologous proteins to answer a wide range of questions about protein evolution.


Platforms: Windows, Mac, Linux

FSA is a probabilistic multiple sequence alignment algorithm which uses a 'distance-based' approach to aligning homologous protein, RNA or DNA sequences.


Platforms: Mac, BSD, Linux

SinicView: A visualization environment for comparisons of multiple nucleotide sequence alignment tools. Background Deluged by the rate and complexity of completed genomic sequences, the need to align longer sequences becomes more urgent, and many more tools have thus been developed. In the...


Platforms: Mac

Clusterfunc is a simple and fast method for Clustering functionally divergent genes by Functional Category. Changes in protein structure and function are reflected at the level of amino acid sequence. This principle suggests that functional divergence - changes in protein function, for instance...


Platforms: Mac

This highly functional and easy to use Scientific Calculator is a must for science students. The main calculator has over 40 functions while an extensive number of utilities, tools and science data reference systems can be called. The calculator contains one of the most extensive measurement...


Platforms: Windows, Windows 8, Windows 7, Windows Server