Genetic Pedigree Worksheets

Recodon is a population genetic simulator that generates samples of nucleotide and codon sequences from populations with recombination, migration and growth. The last version includes new codon models (M1, M7 y M8) and new output options.

Strudel is a graphical utility designed to help you visualize genetic and physical maps of genomes for comparative purposes. The application aims to let the user examine their data at a variety of different levels of resolution, from entire maps to individual markers, and explore syntenic...

ActivityMaker is an incredible all-in-one vocabulary worksheet and puzzle creator, making over a dozen different types of worksheets from your words and definitions! You enter a list of words and definitions (or use lists from Vocab-Flash, Vocab-Flash 2, Vocab-Flash 3, Web ActivityMaker or...


Platforms: Windows

Toolkit for processing genetic data. Currently supports (command-line): Half-IBD (Identity by descent) aka HIRs - between 2 or any number of files (in distances and cM); RAW2PED, PED2RAW conversions; regions of homozygousity and other converters.


Platforms: Mac

The script finds a (near) optimal solution to a variation of the "open" M-TSP by setting up a GA to search for the shortest route (least distance needed for each salesman to travel from the start location to unique individual cities and finally to the end location).Each salesman starts at the...


Platforms: Windows, Mac, *nix, Matlab, BSD Solaris

Finds a (near) optimal solution to a variation of the M-TSP by setting up a GA to search for the shortest route (least distance needed for each salesman to travel from the start location to individual cities and back to the original starting place).Each salesman starts at the first point, and...


Platforms: Windows, Mac, *nix, Matlab, BSD Solaris

The algorithm computes the optimal route from a fixed predetermined starting point to all other cities without returning to the starting point. Requirements: - MATLAB 7.6 or higher


Platforms: Windows, Mac, *nix, Matlab, BSD Solaris

Charlemagne is a genetic programming application which aims to be highly configurable and applicable to a broad range of problems.It is written in Python and Lisp and to some degree is extensible in both languages. It features built-in input-output mapping support, but also provides the ability...


Platforms: *nix, Python, BSD

Matlab worksheets for the synthesis and simulation of 2nd, 3rd, and 4th order systems using passive loop filters. The method employed is derived from Dean Banerjee's Book "PLL Performance, Simulation, and Design" 4th Edition.


Platforms: Matlab

Usage:Jitter = Pn2Jitter(f, Lf, fc)Inputs:f: Frequency vector (phase noise break points), in Hz, row or column.Lf: Phase noise vector, in dBc/Hz, same dimensions, size(), as f.fc: Carrier frequency, in Hz, a scalar.Output:Jitter: RMS jitter, in seconds.Phase noise data can be derived from...


Platforms: Matlab

The function implement the 1D Walash Transform which can be used in signal processing,pattern recognition and Genetic algorithms. The Formula of 1D Walsh Transform is defined as : N-1 q-1 ---- -- 1 | | b[i](m)*b[q-1-i](u) W(u) = --- / f(m)| | (-1) ,u = 0,...,N-1 N ---- | | m=0 i=0 where for...


Platforms: Matlab

The function implement the 1D Walash Transform which can be used in signal processing,pattern recognition and Genetic algorithms. The Formula of 1D Walsh Transform is defined in mfile


Platforms: Matlab

The function generates sequency(Walsh) ordered Hadamard matrix useful for image processing, signal processing, genetic algorithms etc.


Platforms: Matlab

This demo shows how to use MATLAB, Optimization Toolbox, and Genetic Algorithm and Direct Search Toolbox to optimize the design of a double wishbone suspension system.Note: You will need to have the following products installed in order to run this demo: MATLAB, Simulink, Optimization Toolbox,...


Platforms: Matlab

it is used for genetic algorithm implementation for scheduling in wireless sensor networks


Platforms: Matlab

This program demonstrates the optimization by genetic algorithm to find the global maximum height for thee dimensional multiple peak surface. The GA operates by real coding method with elitism


Platforms: Matlab

This program uses an Excel data file "DATA.xls" as an input to the program. the input file consists these worksheets: 1.input load data (active power of each load block and their X-Y cooedinates 2. present transformers and their capacities in kVA 3. candidate points for new transformers 4....


Platforms: Matlab

TurboGA is an augmented version of the Matlab script SpeedyGA (also available on File Exchange). TurboGA uses a simple mechanism called clamping, which, according to a new theory about the workings of genetic algorithms (see http://www.cs.brandeis.edu/~kekib/dissertation.html ), should...


Platforms: Matlab

This code is a demo of using Genetic Algorithms (GA) to solve a simple constrained multi-objective optimization (MOO) problem.The objective is to find the pareto front of the MOO problem defined as follows: Maximize: f1(X) = 2*x1 + 3*x2 f2(X) = 2/x1 + 1/x2 such that: 10 > x1 > 20 20 > x2 > 30The...


Platforms: Matlab

This function is a simple but flexible and usefull tool to implement genetic optimization algorithms that work with populations of custom units. This tool allows to customize the fitness function, the stopping criteria and the cross-over and mutation operators. This is a simple tool, written in...


Platforms: Matlab