Genetic Data Analyzer

These files are an adaptation of the ANOVA variance component estimators to be used in the analysis of genetic data, specifically Cockerham's 1969 Theta. Formulae were adapted from Sokal and Rohlf's 1995 Biometry, and test files from the book are given as reference. Platforms: Matlab

This program, BayeScan aims at identifying candidate loci under natural selection from genetic data, using differences in allele frequencies between populations. BayeScan is based on the multinomial-Dirichlet model. One of the simplest possible scenarios covered consists of an island model in... Platforms: Windows, Mac, Linux

Free software serial port monitor, Com Rs232 sniffer with communication packet data analyzer. This monitoring utility can spy, capture, view, analyze, test com ports activity performing com port connection and traffic analysis with data acquisition and control. You can use this system as device... Platforms: Windows

EyeMap is a visualization and analysis tool for text reading eye movement data. It can process Unicode, proportion/non-proportion and spaced/unspaced reading materials, which supports various languages and experiment methods. Platforms: Windows, Mac, Linux

SimplexNumerica is an object-oriented numerical data analyzer, plot and presentation program. SimplexNumerica is proving to be extremely popular among scientists. Ergonomic programming using the newest Windows programming guidelines with toolbars, context dialogs and interactive diagrams... Platforms: Windows

Toolkit for processing genetic data. Currently supports (command-line): Half-IBD (Identity by descent) aka HIRs - between 2 or any number of files (in distances and cM); RAW2PED, PED2RAW conversions; regions of homozygousity and other converters. Platforms: Mac

LDhat is a C/C++ written project that was specially designed for the analysis of recombination rates from population genetic data. The following programs are included: · convert: Simple manipulation of DNA sequence data · pairwise: Parametric and nonparametric analyses of recombination ·... Platforms: Windows

An automatically-updating library of genomic and genetic data; that provides a fully integrated, visually-advanced toolset for - Sequence alignment and phylogenetics - Sequence analysis, Contig assembly, - primers, restriction analysis - BLAST. Protein structure viewing, NCBI, UniProt, Pubmed... Platforms: Mac

A pH Calculator, a Virtual Titrator, a Real Titration Data Analyzer, a Distribution Diagram Generator - that's CurTiPot, the all-in-one freeware to learn, teach and work with chemical equilibrium of acids, bases, salts and buffers at home, classroom, interactive "dry lab", routine or research... Platforms: Windows

This tool contains a serie of functionalities allowing you to boost analysis capacity and versatility in your Excel decision making models, as it includes the functions of several of our products: Build, analyze and manage multiple scenarios to any model quickly, easily and without having to... Platforms: Windows

CopyToDVD's brand new interface makes it easy to create or copy data, audio or video DVDs or CDs including double layer. Access all of VSO-Software's products from within one interface. CopyToDVD supports a wide range of third party software making it a complete suite for all your burning... Platforms: Windows

MeV or Multiple Experiment Viewer is a Java tool to help you with microarray gene expression data analysis. MeV supports 5 input formats, and provides an intuitive graphical interface for clustering, classification, statistical analysis and theme discovery. Platforms: Windows

MeV or Multiple Experiment Viewer is a Java tool to help you with microarray gene expression data analysis. MeV supports 5 input formats, and provides an intuitive graphical interface for clustering, classification, statistical analysis and theme discovery. Platforms: Mac

IGOR Pro is an interactive software environment for experimentation with scientific and engineering data and for the production of publication-quality graphs and page layouts. IGOR has been used by tens of thousands of technical professionals since its introduction in 1989. Here are a few... Platforms: Mac

OpenAnalyser is a Java program for scientifc data analysis. It was especially designed to analyse cardiovascular florescence imaging data. OpenAnalyser provides a simple, yet powerful plugin system, which allows the extension of the program functionality with user contributed code, including... Platforms: Windows

QtGrace is a small, easy to use application specially designed to offer users a program to display or plot data, analyze data and prepare it for printing. This software is special because it combines the convenience of a graphical user interface with the power of a scripting language which... Platforms: Windows, Windows Vista, 7

CNVision is a small, simple application designed to simplify CNV analysis of Illumina genotyping data. It will simplify all stages of predicting and analyzing CNVs, from running prediction algorithms and combining their results to visualizing the raw data and designing qPCR primers for... Platforms: Windows

QXRD is software for the acquisition and analysis of X-ray data taken with 2 dimensional detectors. The software can drive a Perkin Elmer XRD series flat panel detector and can be remote-controlled via a socket interface, or directly from SPEC. Platforms: Windows

SansView is tool designed to extend the SANS data analysis capabilities by developing new tools for users. The DANSE/SANS group will provide analysis functionality through three applications. Those applications will be incrementally developed throughout the life of the project. The... Platforms: Windows

The application loads microarray data (gene expression ratios) and determines which genes are up- or downregulated by a user-defined ratio cut-off level. For each experiment, lists of differentially expressed genes are computed. Every list will be compared to every other list, and the number of... Platforms: Windows