Excess Protein

Audification (or sonification) is the technique of using the sense of hearing to analyse data. The advantage of audification over visualisation in data analysis is that sound has the property that when different notes are played togheter they can still be individually heard: in vision colours... Platforms: Matlab

It can be used to measure the total concentration of carbohydrate, protein, and lipid contents from solid wastes.The procedure was formulated to generate the detailed input required for the International Water Association (London, United Kingdom) Anaerobic Digestion Model number 1 (IWA-ADM1).The... Platforms: Matlab

If you're not running at least PHP 5.2, quit giving me bad ratings and use something else.Combining HTML "minification" with cache and HTTP compression (WP Super Cache, or similar) will cut down your bandwidth and ensure near-immediate content delivery.This plugin will compress your HTML by... Platforms: PHP

This is an enhancement for Wordpress plugin review page.Features * Comment page, you can select all of the articles page or the specific article page; * Can choose to display the comments sort is in order or reverse order to display the comments, the same can also specify a specific article in... Platforms: PHP

Alters a figure so that it has the minimum size necessary toenclose all axes in the figure without excess space around them.Works for figures containing multiple axes as subplots.Note that tightfig will expand the figure to completely encompass allaxes if necessary.Returns an error if the figure... Platforms: PHP

Virusbanker is a MySQL database of virus sequences and alignments that is accessed via a Java program. To use the database you need to download the Java program. The program creates an interface with three spreadsheets and a selection menu. We describe the process of setting up VirusBanker below;... Platforms: Mac

Swiss-PdbViewer (aka DeepView) is an application that provides a user friendly interface allowing to analyze several proteins at the same time. The proteins can be superimposed in order to deduce structural alignments and compare their active sites or any other relevant parts. Amino acid... Platforms: Mac

alignlib is a C++ library for computing and manipulating sequence alignments of protein sequences. Most of the functions and classes are exported to python thus permitting easy scripting of complex tasks. Platforms: Mac

Voroprot: an interactive tool for the analysis and visualization of complex geometric features of protein structure We present Voroprot, an interactive cross-platform software tool that provides a unique set of capabilities for exploring geomeric features of protein structure. Voroprot allows... Platforms: Mac

A GUI program to create the plasmid database forms for BGME lab. This program presents user with a data entry form for entering plasmid information and automatically converts DNA sequence to protein, aligns it, and creates text output file. Platforms: Mac

The Ramachandran Plot Explorer really offers something new. The Ramachandran Plot Explorer is designed to make it easy to examine the conformation of a polypeptide - through the interactive Ramachandran plot (?Ya* -?Y? angles) and ?Ya*?-angle tool. Simply click on a residue, then drag the marker... Platforms: Mac

ProDy is a Python package designed for protein structural dynamics analysis. ProDy is developed by Ahmet Bakan and licensed under the GPLv3. New features and functions are constantly being added to ProDy. The following are the main features that are present and working fine: Protein structure... Platforms: Mac

For this ProfDistS provides a phylogenetic framework that uses individual RNA secondary structures in reconstructing phylogenies based on sequence-structure alignments - using Profile Neighbor Joining (PNJ) with manual or iterative and automatic profile definition. Moreover, ProfDistS can deal... Platforms: Mac

AstroDriller3020 is a whacky physics based puzzle game that is simple and easy to get into, but has hidden depth and strategy. The goal is to help the lovably gruff AstroDrillers collect precious gems from within different colored asteroids. To do this, you must use your Laser Turrets to guide... Platforms: Mac

LinkOptimizer is a workflow automation solution which works with Adobe Photoshop to: * reduce the size of images linked to InDesign document by eliminating excess image data * perform essential image adjustments, such as color conversion and sharpening * convert file formats. LinkOptimizer allows... Platforms: Mac

A Tool that manages Pathway Retrieval, Visualization and Analysis. Import a Gene or Protein Set from any Excel file. Find matching Pathways from KEGG. Integrate, visualze and analyze your Data in Seconds with interactive Force-directed Layout . Platforms: Mac

ImageComparitor is a utility for Mac OS X and Windows (technically everything since it's a Java program) designed to compare pictures/image files inside a folder for duplicate images (based on file hash) and remove excess duplicates Platforms: Mac

XINViewer is a DIP XIN Protein-Protein Interaction Network viewer written in Java. It was written entirely from scratch as a final project for CH391L. Platforms: Mac

The Mass Spectrometry Laboratory is a multidisciplinary laboratory, given the versatility of mass spectrometric techniques. The objective of the Mass Spectrometry Laboratory is to contribute to the development of new fundamental concepts and to enlighten their applications in the fields of... Platforms: Mac

Biomatters was founded on the principle of creating software that can be used by all researchers in their daily work. Our technology converts raw data into meaningful, visual information, simplifying research and ultimately improving efficiency. Biomatters???*a*? flagship software packages are:... Platforms: *nix