Added: August 06, 2013 | Visits: 289
MethMarker facilitates the design and optimization of gene-specific DNA methylation assays. Beyond its use as an epigenetic primer-design tool, it provides extensive support for epigenetic biomarker optimization. For a given gene or genomic region, MethMarker helps design DNA methylation assays...
Platforms: Mac
Released: October 10, 2012
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Added: October 10, 2012 | Visits: 575
iMethy is a handy, easy to use genome-wide DNA methylation analysis and visualization application based on next generation sequencing.
Firstly, it holds the command-line pipeline to align the bisulfite-treated short read, identify the methylcytosine at CG/CHG/CHH sites, detect the methylation...
Platforms: Windows
Released: September 04, 2012
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Added: September 04, 2012 | Visits: 337
QDMR, which is actually short for Quantitative Differentially Methylated Regions is built to be a quantitative approach to quantify methylation difference.
It can also be used to identify DMRs from genome-wide methylation profiles by adapting Shannon entropy.
The platform-free and species-free...
Platforms: Windows
Added: August 25, 2013 | Visits: 349
PriorsEditor is a general workbench for regulatory region analysis and transcription factor binding site discovery. The program emphasizes the use of positional priors to focus the search for binding sites towards portions of DNA sequences that are considered more likely to contain true...
Platforms: Mac
Windows Software
Albina Merfyn - I find this to be really easy to use. I can...
