Dna Sequence Of A Protein

Usage: [mfTutteMap] = TutteMap(mnTriangulation)Maintaining the existing triangulation, this function maps a surface mesh onto a planar unit circle. Tutte's algorithm [1] is used. The simple technique for finding point locations is from [2].'mnTriangulation' is an Nx3 array as returned by...

The program takes the intermediate stoichiometric matrix of a chemical reaction mechanism as the input and gives the intermediate nodes in terms of all the possible combinations of p-(q-1) reaction steps. This program is complimentary to the "Reaction Routes" program. Using both these programs a...

This function will return true if the first input structure contains the field in the second input string and in turn that field has the field given in the third input string and so on. This allows A.b.c = 2; to be checked as:isfieldRecursive(A,'b','c')ans =1Which would return false if either b...


Platforms: Matlab

The Life Of A Pacifist Is Often Fraught With Conflict is a great story game that is talking about games.


Platforms: Mac

Fixes paragraphs, removes returns within a paragraph and removes multiple empty lines between paragraphs, replaces multiple spaces with a single space and removes spaces at the beginning and at the end of a line, replaces each tab with a specified number of spaces, replaces each sequence of a...


Platforms: Windows

This 30 days fully functional demo of CLC DNA Workbench provides a wide range of advanced DNA sequence analyses, and is based on the same user-friendly and integrated software environment as CLC Free Workbench. Some analyses are: - Assembly of DNA sequencing data - Graphically and...


Platforms: Mac

StarORF facilitates the identification of the protein(s) encoded within a DNA sequence. Using StarORF, the DNA sequence is first transcribed into RNA and then translated into all the potential ORFs (Open Reading Frame) encoded within each of the six translation frames (3 in the forward direction...


Platforms: Mac

Bio2Midi converts the text of a DNA or protein sequence to a MIDI file, which you may immediately audition, or import into any MIDI sequencer for further compositional processing. Choose to listen to the sequences as 4-note DNA bases, or as 20-note protein amino acids, or both at once. You can...


Platforms: Windows

ProtAnnot is a small, Java based application is a protein annotation viewer that displays protein annotations in the context of the genomic sequence. This software is a making it easy to see how alternative mRNA structures affect the various protein products encoded at a locus. for WindowsAll


Platforms: Windows

This is a simple functino to import a series of dicom files using the dicomread function.Please go through the comments in the code. It is quite a simple one but might be handy to use it quickly.Philosophy:I wanted to have a reliable, commented code for ease of use so that I can focus on bigger...


Platforms: Matlab

Jnomics is a collection of cloud-scale DNA sequence analysis tools


Platforms: Mac

This script contains a function to check on the occurence of a set of characters.


Platforms: Windows, Mac, *nix, Python, BSD Solaris

The goal of this demo is to establish a general template for simulating and animating simple assembly lines. In this example, we have two conveyor belts that have motions perpendicular to each other. Furthermore, a package needs to be mounted onto the conveyors and transferred across them as well...


Platforms: Matlab

The Fourier transform takes a signal in the time domain and maps it, without loss of information, into the frequency domain. The frequency domain representation is exactly the same signal, in a different form. The inverse Fourier transform(IDFT) maps the signal back from the frequency domain into...


Platforms: Matlab

This contest concerns a very simplified two-dimensional version of the protein folding problem. Given the amino acid sequence of a simplified protein, your job is to determine a final "optimally folded" configuration. Each potential arrangement of the protein sequence is associated with an energy...


Platforms: Matlab

The sequence reader can be used to read aloud a part of a sequence. This is useful if you wish to compare a sequence on the screen to a printed sequence. When the plug-in is installed, a sequence - or part of a sequence - can be read aloud in the following way.


Platforms: Mac

UML::Sequence is a Perl module to render UML sequence diagrams, often by running the code. SYNOPSIS use UML::Sequence; my $tree = UML::Sequence->new(@methods, @outline, &parse_method); print $tree->build_xml_sequence(Title); To use this package, or see how to use it, see genericseq.pl...


Platforms: *nix

DNA Replicator is a graphical tool (written in java) that compute the complementary sequence from an input DNA sequence. It's a really easy used application.


Platforms: Windows, Mac, Linux

CodonCode Aligner is a leading software program for DNA sequence analysis. Widely used in evolution research, biogeography, and other biomedical fields, it offers many features not found in competing programs, including the ability to compare contigs with ClustalW and muscle, trace sharpening,...


Platforms: Mac

This module first does a net view command , and gets the list of computers in the domain. It connects to each computer , performs size check and returns the size of the harddisk. Please note that , the file and dir sizes are caluclated in DOS. Windows performs a sort of approximation. So there...


Platforms: Windows, Python,