Csf Protein

MGWT: Identification of protein coding regions using the ModifiedGabor-wavelet transform.Sequence of test:F56F11.4.fasta (included into the zip file)http://www.ncbi.nlm.nih.gov/entrez/viewer....de&val=AF099922http://www.vision.ime.usp.br/~jmena/projec...ome_results/F5/References:[1] J. P....

UNFOLDPROTEIN(data, bracket) calculates the melting temperature, Tm, of a protein from a given Nx2 array of unfolding data (with N >= 10). In the case of unfolding studies performed using circular dichroism spectroscopy, the second Tm calculated using the maximum of the first derivative of the CD...

To further understand the implementation of hyperparameters re-estimation technique in Bayesian hierarchical model, we added two more prior assumptions over the weight in BayesPI, namely Laplace prior and Cauchy prior, by using the evidence approximation method. In addition, we divided...


Platforms: Matlab

StarORF facilitates the identification of the protein(s) encoded within a DNA sequence. Using StarORF, the DNA sequence is first transcribed into RNA and then translated into all the potential ORFs (Open Reading Frame) encoded within each of the six translation frames (3 in the forward direction...


Platforms: Mac

FSA is a probabilistic multiple sequence alignment algorithm which uses a "distance-based" approach to aligning homologous protein, RNA or DNA sequences.


Platforms: *nix

Cscape is an application for visualizing and navigating through data from a Reverse Phase Protein Microarray (RPMA). Cscape uses the Google Maps API to map the RPMA data on top of an image of a cancer cell and its associated pathways.


Platforms: *nix

The Protein Data Bank (PDB) was established in 1971 as a repository of the atomic coordinates of protein structures (Bernstein et al., 1997). It has since outgrown that role, proving invaluable not only to the research community but also to students and educators (Berman et al., 2002). WWW::PDB...


Platforms: *nix

Fast5 is a probabilistic file format for the storage of nucleotide and protein sequences based on hdf5.


Platforms: *nix

ProDy is a free and open-source Python package for analyzing protein structural dynamics. It allows for quantitative analysis of heterogeneous experimental structural datasets and comparison with theoretically predicted conformational dynamics. The input for ProDy is the atomic coordinates of...


Platforms: *nix

This screensaver shows real 3D models of biological molecules rotating. Your screen will look like screens of computers in science fiction films! Six molecules are available in the current version: four prototypes of DNA (Deoxyribonucleis Acid - storage of genetics information) and two proteins -...


Platforms: Windows

Brava! Reader is a free PDF Viewer, TIFF Viewer and CSF (content sealed format) Viewer. View and print TIFF, PDF and CSF files. Brava! Reader opens files quickly without startup delay and runs either as a desktop application or as an ActiveX with IE. TIFF imaging supports, monochrome (fax)...


Platforms: BeOS, Palm OS, Windows

Multi-format desktop software to view, compare, print - PDF, TIFF, CSF, HPGL, AutoCAD, MS Office formats (additional fee), and much more. Save files to PDF or secure CSF. Compare drawing and image files dynamically using the unique slider flip, or by showing highlighted differences, or compare...


Platforms: Windows

Bio2Midi converts the text of a DNA or protein sequence to a MIDI file, which you may immediately audition, or import into any MIDI sequencer for further compositional processing. Choose to listen to the sequences as 4-note DNA bases, or as 20-note protein amino acids, or both at once. You can...


Platforms: Windows

Pimp My Meal 1.0 is a simple program that calculates the quantity of calories according to grams of protein, fat and carbohydrates, and expresses the results in a diagram where you can also see percentages.Calculate the BMI: Body Mass Index, and the BMR: Basic Metabolism Rate, or the calories...


Platforms: Windows

In the age of Molecular Biology and Genetic Engineering you have a chance to see and interactively analyze 3D structure of such complex Biological Macromolecules as Proteins and DNA in 3D STEREO mode on your computer, which you have just now. Using The Stereoscopic Visual Analyzer of Biological...


Platforms: Windows

StrBio is a set of Java classes and libraries useful for development of software for computational structural biology research. They are licenced under the LGPL. he strbio.org classes are the basis for several published research projects, including the Pred2ary secondary structure prediction...


Platforms: *nix

Structure is a screensaver for Mac OS X that draws on the National Center for Biotechnology Information's protein databases to display beautiful 3D protein structures on your screen. It ships with about ten sample structures and via the Internet has seamless access to a database of tens of...


Platforms: Mac

MacVector... Researchers who want a simple but comprehensive desktop sequence analysis application continually turn to MacVector, the leading sequence analysis package for the Macintosh. MacVector provides sequence editing, primer design, Internet database searches, protein analysis, sequence...


Platforms: Mac

The ProtParam widget computes physico-chemical parameters for your protein sequences at ExPASy. You just have to type or paste your sequence in the input field.


Platforms: Mac

Easy to use diet tracker application that will help you lose weight by tracking your daily calorific intake. Includes access to a database of over 40,000 food items with no ongoing subscription fees. Both imperial and metric measurements are supported making it easy to add new food and exercise...


Platforms: Mac