Blast Similarity Matrix

Bio::Index::Blast is a Perl module with indexes Blast reports and supports retrieval based on query accession(s). SYNOPSIS use strict; use Bio::Index::Blast; my ($indexfile,$file1, $file2); my $index = new Bio::Index::Blast(-filename => $indexfile, -write_flag => 1);...

Meta Matrix Library is a modular designed collection of C libraries. Meta Matrix Library was developed as part of the Free Finite Element Package to provide easy and consistent access to numerical linear algebra software for sparse and dense matrices. The dense matrix and vector operations of...

Math::Zap::Matrix is a Perl module for 3*3 matrix manipulation. Synopsis Example t/matrix.t #_ Matrix _____________________________________________________________ # Test 3*3 matrices # philiprbrenan@yahoo.com, 2004, Perl License...


Platforms: *nix

exmats goal is to provide an easy to use, yet very efficient matrix library. Overloaded operators allow to write algebraic expressions like v=A*u +u in C++, instead of bunch of boring functions. This syntactic sugar comes with runtime cost, one way to eliminate the overhead is to use Expression...


Platforms: *nix

WordNet::Similarity::Visual is a Perl extension for providing visualization tools for WordNet::Similarity. SYNOPSIS Basic Usage Example use WordNet::Similarity::Visual; $gui = WordNet::Similarity::Visual->new; $gui->initialize; This package provides a graphical extension for...


Platforms: *nix

Bio::Matrix::PSM::InstanceSite is a PSM site occurance. SYNOPSIS use Bio::Matrix::PSM::InstanceSite; #You can get an InstanceSite object either from a file: my ($instances,$matrix)=$SomePSMFile->parse_next; #or from memory my %params=(seq=>TATAAT, id=>"TATAbox1",...


Platforms: *nix

WordNet::Similarity::PathFinder is a Perl module to implement path finding methods (by node counting) for WordNet::Similarity measures of semantic relatedness. SYNOPSIS use WordNet::QueryData; my $wn = WordNet::QueryData->new; use WordNet::Similarity::PathFinder; my $obj =...


Platforms: *nix

WordNet::Similarity::vector_pairs is a Perl module for computing semantic relatedness of word senses using second order co-occurrence vectors of glosses of the word senses. SYNOPSIS use WordNet::Similarity::vector_pairs; use WordNet::QueryData; my $wn = WordNet::QueryData->new(); my...


Platforms: *nix

WordNet::Similarity is a collection of Perl modules for computing measures of semantic relatedness. SYNOPSIS Basic Usage Example use WordNet::QueryData; use WordNet::Similarity::path; my $wn = WordNet::QueryData->new; my $measure = WordNet::Similarity::path->new ($wn); my $value =...


Platforms: *nix

Math::Matrix can multiply and invert Matrices. The following methods are available: new Constructor arguments are a list of references to arrays of the same length. The arrays are copied. The method returns undef in case of error. $a = new Math::Matrix ([rand,rand,rand],...


Platforms: *nix

Matrix calculator for basic matrix operations and matrix decompositions. 1. Basic matrix operations: +, -, .*, *, ', determinant, inverse, rank etc. 2. Matrix decompositions: LU decomposition, QR decomposition. Implement basic matrix operations and matrix decompositions. 1. Basic matrix...


Platforms: Windows

Matrix BCG for Brand Portfolio Management and Analysis. Use the matrix BCG tool of MM4XL software to analyze the competitive and financial performance of your brand portfolio to make better business decisions in brand management. The matrix BCG is a very popular brand management tool. Its...


Platforms: Windows

Cylindrical BLAST Viewer is a small, easy to use application specially designed to offer users a 3D viewer that arranges BLAST hits and other bioinformatics-related alignments in a rotating, cylindrical display. Basically this tool arranges the alignments in a cylinder, which spins past the eye...


Platforms: Windows

Two of the most feared enemy races joined forces to launch the ultimate attack, known as 'Sun Blast'. The only chance for survival is to seek and destroy all enemy starships, which are the main threat. You will choose the ship that best suits your needs and begin the adventure of your life....


Platforms: Mac

The original 3D version of the Matrix is back better than ever! Watch the Matrix code as you've never seen it before, in mind-bending real-time 3D! Features a traditional 2D code display or the extra-nifty 3D code display, as well as many other configuration options.Features Include: - Option to...


Platforms: Mac

Quadrophonic Matrix Decoder & Player is a small, simple, Java based application specially designed to help you decode quadrophonic matrix encoded file. Quadrophonics is a technology developed and used in the 1970's that applies an encoding matrix to the four input channels LF (Left Front), RF,...


Platforms: Windows

Quadrophonic Matrix Encoder is a small, simple, Java based application specially designed to help you encode your WAV files with just a few clicks. Quadrophonics is a technology developed and used in the 1970's that applies an encoding matrix to the four input channels LF (Left Front), RF, LB...


Platforms: Windows

Bring the look of The Matrix to your Internet Explorer browser with this simple designer theme SEARCH: Our primary revenue source is BING. We will reset your default search engine when installed so please give BING a try! PRIVACY: We respect your privacy. We do track some data - but it's only...


Platforms: Windows

Theme your Firefox browser with the green Matrix code! Very stylish theme with some cool tools built in... SEARCH: Our primary revenue source is BING. We will reset your default search engine when installed so please give BING a try! pssst.. you can always switch back to your favorite if ya want!...


Platforms: Windows

Matrix screensaver is legendary screensaver that emulates green matrix code on your screen. Green characters are running vertically down in columns on the black background. If you want to see what is inside the matrix and decrypt it this is your screensaver. Very simple to install and use. Just...


Platforms: Windows, Windows 8, Windows 7