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Av Compression Tools software
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Av Compression Tools

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Added: March 15, 2010 | Visits: 1.710

Bio::Tools::Run::PiseWorkflow Bio::Tools::Run::PiseWorkflow is a class to create a Pise workflow using Pise application objects as methods. A workflow is defined by a set of methods which all instanciate the class PiseApplication. SYNOPSIS # First, create a Bio::Tools::Run::AnalysisFactory::Pise object: my $factory = new...



Platforms: *nix

License: Freeware Size: 829.44 KB Download (96): Bio::Tools::Run::PiseWorkflow Download

Added: January 14, 2010 | Visits: 1.378

Bio::Tools::AlignFactory Bio::Tools::AlignFactory is a base object for alignment factories. SYNOPSIS You wont be using this as an object, but using a dervied class like Bio::Tools::pSW Holds common Alignment Factory attributes in place.





Platforms: *nix

License: Freeware Size: 4.7 MB Download (164): Bio::Tools::AlignFactory Download

Added: March 27, 2010 | Visits: 1.870

Bio::Tools::Run::TribeMCL Bio::Tools::Run::TribeMCL is a method for clustering proteins into related groups, which are termed protein families. SYNOPSIS use Bio::Tools::Run::TribeMCL; use Bio::SearchIO; # 3 methods to input the blast results # straight forward raw blast output (NCBI or WU-BLAST) my @params =...


Platforms: *nix

License: Freeware Size: 829.44 KB Download (207): Bio::Tools::Run::TribeMCL Download

Added: October 24, 2010 | Visits: 1.514

Bio::Tools::Run::PiseApplication::fasta Bio::Tools::Run::PiseApplication::fasta is a Bioperl class for sequence database search. Parameters: fasta (Excl) Fasta program query (Sequence) Query sequence File pipe: seqfile seqtype (Excl) Is it a DNA or protein sequence (-n) protein_db (Excl) Protein Database nucleotid_db...


Platforms: *nix

License: Freeware Size: 82.94 KB Download (100): Bio::Tools::Run::PiseApplication::fasta Download

Added: August 02, 2010 | Visits: 1.799

Bio::Tools::Run::PiseApplication::align2model Bio::Tools::Run::PiseApplication::align2model is a Bioperl class for align2model - create a multiple alignment of sequences to an existing model. Parameters: align2model (String) run (String) Run name db (Sequence) Sequences to align (-db) model_file (InFile) Model (-i) pipe:...


Platforms: *nix

License: Freeware Size: 829.44 KB Download (94): Bio::Tools::Run::PiseApplication::align2model Download

Added: January 07, 2010 | Visits: 1.738

Bio::Tools::Run::PiseApplication::consensus Bio::Tools::Run::PiseApplication::consensus is a Perl module. Bioperl class for: CONSENSUS Identification of consensus patterns in unaligned DNA and protein sequences (Hertz, Stormo) References: G.Z. Hertz and G.D. Stormo. Identification of consensus patterns in unaligned DNA and protein...


Platforms: *nix

License: Freeware Size: 829.44 KB Download (94): Bio::Tools::Run::PiseApplication::consensus Download

Added: October 23, 2010 | Visits: 2.080

Bio::Tools::Run::PiseApplication::charge Bio::Tools::Run::PiseApplication::charge is a Perl module. Bio::Tools::Run::PiseApplication::charge Bioperl class for: CHARGE Protein charge plot (EMBOSS) Parameters: (see also: http://bioweb.pasteur.fr/seqanal/interfaces/charge.html for available values): charge (String) init...


Platforms: *nix

License: Freeware Size: 829.44 KB Download (95): Bio::Tools::Run::PiseApplication::charge Download

Added: June 10, 2010 | Visits: 1.150

Dirac Dirac is a video codec that provides general-purpose video compression and decompression tools comparable with state-of-the-art systems. Dirac video codec is available for distribution under the MPL version 1.1 software license. Dirac is an open source video codec. It uses a traditional...


Platforms: *nix

License: Freeware Size: 716.8 KB Download (112): Dirac Download

Added: February 26, 2010 | Visits: 1.608

ATA over Ethernet Tools ATA over Ethernet Tools are intended for use in conjunction with an ATA over Ethernet (AoE) driver for a Linux 2.6 kernel. They perform simple tasks like listing available devices, triggering device discovery, and restricting the network interfaces on which AoE is performed. Whats New in This...


Platforms: *nix

License: Freeware Size: 19.46 KB Download (118): ATA over Ethernet Tools Download

Added: June 27, 2010 | Visits: 1.549

ICMP Hostname Tools for Linux The ICMP Hostname Tools for Linux include a responder daemon, a lookup tool, and a nameswitch module to handle ICMP host name functions. The NSS module caches all requests (including failures) and honors the TTL value sent by the responding host. It uses a configuration file called...


Platforms: *nix

License: Freeware Size: 26.62 KB Download (105): ICMP Hostname Tools for Linux Download

Added: January 05, 2010 | Visits: 4.455

Cmos password recovery tools Cmos password recovery tools decrypts password stored in cmos used to access BIOS SETUP. Works with the following BIOSes: - ACER/IBM BIOS - AMI BIOS - AMI WinBIOS 2.5 - Award 4.5x/4.6x/6.0 - Compaq (1992) - Compaq (New version) - IBM (PS/2, Activa, Thinkpad) - Packard Bell - Phoenix...


Platforms: *nix

License: Freeware Size: 34.82 KB Download (1337): Cmos password recovery tools Download

Added: November 20, 2010 | Visits: 1.416

Heirloom Development Tools Heirloom Development Tools package provides yacc, lex, m4, make, and SCCS as portable derivatives of the utilities released by Sun as part of OpenSolaris. The OpenSolaris utilities were in turn derived from the original Unix versions, and are assumed be conforming implementations of the POSIX...


Platforms: *nix

License: Freeware Size: 378.88 KB Download (95): Heirloom Development Tools Download

Added: October 17, 2010 | Visits: 1.175

Bio::Tools::CodonTable Bio::Tools::CodonTable is a bioperl codon table object. SYNOPSIS # This is a read-only class for all known codon tables. The IDs are # the ones used by nucleotide sequence databases. All common IUPAC # ambiguity codes for DNA, RNA and animo acids are recognized. # to use use...


Platforms: *nix

License: Freeware Size: 4.7 MB Download (121): Bio::Tools::CodonTable Download

Added: October 17, 2010 | Visits: 911

lopster-tools lopster-tools is a set of tools for use with Lopster that allows users to view statistics for download and upload transfer, incomplete and finished files, how many MB are downloaded or uploaded, and the difference between down- and upload, amongst other features.. Get KLopsterUtils at...


Platforms: *nix

License: Freeware Size: 614.4 KB Download (91): lopster-tools Download

Added: May 20, 2010 | Visits: 1.324

net-tools The net-tools package contains a collection of programs that form the base set of the NET-3 networking distribution for the Linux operating system. It contains the important tools for controlling the network subsystem of the Linux kernel including arp, hostname, ifconfig, netstat, rarp and...


Platforms: *nix

License: Freeware Size: 194.56 KB Download (103): net-tools Download

Added: November 23, 2010 | Visits: 1.172

Bio::Tools::Run::PiseApplication::freak Bio::Tools::Run::PiseApplication::freak is a Perl module. Bio::Tools::Run::PiseApplication::freak Bioperl class for: FREAK Residue/base frequency table or plot (EMBOSS) Parameters: (see also: http://bioweb.pasteur.fr/seqanal/interfaces/freak.html for available values): freak...


Platforms: *nix

License: Freeware Size: 829.44 KB Download (88): Bio::Tools::Run::PiseApplication::freak Download

Added: January 07, 2010 | Visits: 1.153

Oasis XML Tools Oasis XML Tools is a small utility to easily manage OpenOffice.org documents at xml level from outside OpenOffice.org suite. You can view and edit (with kwrite) the main xml files present in OpenOffice.org documents and update these documents with the changes. Also you can compare two or...


Platforms: *nix

License: Freeware Size: 2.05 KB Download (127): Oasis XML Tools Download

Added: October 20, 2010 | Visits: 765

Mail::Digest::Tools Mail::Digest::Tools is a Perl module that has tools for digest versions of mailing lists. SYNOPSIS use Mail::Digest::Tools qw( process_new_digests reprocess_ALL_digests reply_to_digest_message repair_message_order consolidate_threads_multiple consolidate_threads_single...


Platforms: *nix

License: Freeware Size: 68.61 KB Download (90): Mail::Digest::Tools Download

Added: May 19, 2010 | Visits: 1.451

KMail Power Tools KMail Power Tools is meant to be a suite of enhancements to KMail and may be other mail user agents. It is currently composed of only one (perl) script that acts as a filter (take input from stdin, outputs the modified mail to stdout), adds dialog boxes to kmail, and allows the user to: -...


Platforms: *nix

License: Freeware Size: 10.24 KB Download (103): KMail Power Tools Download

Added: October 13, 2010 | Visits: 1.140

Ionflux Tools Class Library The Ionflux Tools Class Library is a lightweight multi-platform C++ framework designed for rapid development of applications in a client/server architecture. The Ionflux Tools Class Library is released under the GNU General Public License, meaning it is free software! (See LICENSE in the...


Platforms: *nix

License: Freeware Size: 245.76 KB Download (95): Ionflux Tools Class Library Download

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